Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15263 109 5e-19 >seq15263 Length=38747 Score = 109 bits (120), Expect = 5e-19 Identities = 883/1410 (63%), Gaps = 71/1410 (5%) Strand=Plus/Plus Query 138484 TCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAA 138543 || || |||| |||| |||| | | | ||| || |||||||| || || ||| ||| Sbjct 33980 TCATTCATCAAATATTTGTTCACAATCGTAAACTCGCCGGCCAAGACGCGCCGATTGTAC 34039 Query 138544 ATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCG 138603 || ||| || | || |||| |||||| ||||| || |||||||| ||||| | || Sbjct 34040 ATATTGGACGTATACGGTTCAATCGATTCATTGTTGCCAAGAATCTGCGCCGTCGAAGCT 34099 Query 138604 GTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC---GTTCC 138660 || |||||| |||||| | | || || || | |||| |||||| ||||| Sbjct 34100 GTTGGCATGGGCGCCACGAGCAACGAGTTGCGAATCCCGTA---CTTGATCACCTGTTCC 34156 Query 138661 TTGAGCGACGACCAGTCCCACAAATC---GCTAGGTTTTTTGTTCCACATATCGTACTGT 138717 || | | ||| |||||||| | | ||| | | ||||| ||| |||| Sbjct 34157 TTCAATGTGTTCCAATCCCACAAGCCTGAGGACGGTGTCACGCCCCACAAATCAAACTGG 34216 Query 138718 AACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCC 138777 || || || ||| || || |||| | ||| ||||| || | |||| || Sbjct 34217 AAGATCCCTTTACTCGCAGGGGAGCCTGCAAACGTCTCGTACGGTCCCAGTTCTTTGGCA 34276 Query 138778 AACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGC 138837 | ||| | || ||| | ||| || | || || ||||| |||| || || | Sbjct 34277 ATCTCCATCGACGTCTCCATGGCAGCAAAATAGATGGTTTCAAAGATCTTCTTGTT---C 34333 Query 138838 AAT---CGGGCCTCGGCGCTCTCGTACGG------CATGCGGAGCATCGTGAACGCGTCG 138888 ||| || || ||| ||||||| | || |||| ||| | ||||| ||| Sbjct 34334 AATTCCCGCGCTTCGTCGCTCTCAAATGGATAATTCATGAGGA------TAAACGCATCG 34387 Query 138889 GCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCT 138948 || || || || || || | || | || ||||| |||| ||| |||| ||| | Sbjct 34388 GCAAGGCCCTGGACCCCGATCCCAATCGGACGATGCCGCATATTGGACGTACGTGCTTCC 34447 Query 138949 TCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTC 139008 | | || ||||| || ||||| || | ||||||| |||||| || || || ||| Sbjct 34448 TTTACGGGGTAATAATTGACATCAATCACCTTGTTTAGGTTTCGCGTCACGACTTTGGTC 34507 Query 139009 GTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAAT 139068 | | ||| || ||||| | | | | || | |||| |||||| Sbjct 34508 ACGTCGTACAATTTTTGAAAATTGAACG----CACGGT-----------CGTCCACAAAT 34552 Query 139069 TT-GTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG-GTCGCTGTATT 139126 || | | || | | ||| || | ||| ||||| |||||||| ||||| | || |||| | Sbjct 34553 TTCGGTAACGCCAC-CGATGCGAGGTTACACACGGCCACTTCATCGGGCGACG-TGTACT 34610 Query 139127 CGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTT 139186 | | | ||| ||||| ||||| | ||||| || | ||| |||||||| | Sbjct 34611 CAATCACTTCACAGCACAAGTTACTCGATCGAATCGTGCCGAGATTCTGTTGATTCGACT 34670 Query 139187 TTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTA 139246 | || || || || ||||| ||||| |||| ||| || || | || | || | Sbjct 34671 TGCGATTCGCCGCGTCCTTGTACAGCATGAACGGCACGCCCGTCTCAATCTGGGCGTCCA 34730 Query 139247 TAATGAATTTGAACAAGTCCCTAGCTTGTATT---TGACGCACGTAAAGTTCGTCGCGCT 139303 ||| |||| | |||| || | ||| || || | ||| | | Sbjct 34731 AGATGGCAAACCACAATTGTTGGGCTTTCATGGTCTTCCGCGCGC---GTCCATCGTGTT 34787 Query 139304 CGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACAC 139362 |||||| | |||| | | || || ||| | || || || | | | || | | | Sbjct 34788 CGTACTGTGCGTACAAGTTTTCAAACTCGG-CGCCCCAGCATTCGTACAAACCGGG-CGC 34845 Query 139363 TT-GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 || || ||||| | | ||| | || || || | |||||| |||| |||| ||| Sbjct 34846 TTCGTTCGGACAGAATAAACTCCACTCTCCATTGGCTTCTACGCGCTTCATAAACAAATC 34905 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT-TATCTTCCGAACCCATGTTAC 139480 ||||||||||| || | | |||||| || ||| | || || || || || | Sbjct 34906 AGGAATCCACAAGGCATAAAACAAATCACGTGCCCGATGTAACT--CGTTGCCGTGGTT- 34962 Query 139481 GTTTC---ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCA 139537 |||| | || | || || | ||||| || ||||| || |||| |||||||| | Sbjct 34963 -TTTCCGTAAGTCCAAAAACTCGAGCACGTCGGCATGCCACGGCTCCAAGTAGATGGCAA 35021 Query 139538 TTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGC 139594 | |||||| ||||| ||| |||||||| || | ||| | | || ||| || |||| Sbjct 35022 ACGAGCCTTTGCGTTTCCCGCCGCCTTGATCCACATACCGTGCCGTATCATTAAAGACGC 35081 Query 139595 GCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAG 139654 ||||||| || | || ||| | |||||||||| || ||| ||||||| | Sbjct 35082 GCAACATGGGAATGATCCCATTCGAGGAGCCGTTGGTGCCCCGAATGTAACTGTTGGTTG 35141 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-A 139713 |||| | || ||| | | |||| || || || ||| | |||| || || | | ||| | Sbjct 35142 CTCGAATGTTATGCATACTGATCCCTATCCCTCCGGCCCATTTAGAGAT--ACAGGCACA 35199 Query 139714 TCGCGTAA-TGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772 | | ||| || ||||| || ||| || || || ||||| | | ||||| || Sbjct 35200 TTGTTTAAGCGTATCGTAAATCCCTTCAATCGAATCATCTTGCATTGCTAATAGAAAACA 35259 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 || || | ||| || | || || || ||| | || || ||||||| || || Sbjct 35260 CGAGGACAATTGGGGCCGGGGTGTCCCCGCGTTAAATAACGTTGGCGTCGCGTGGGTAAA 35319 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTC 139862 | | || |||||| | |||||||| || Sbjct 35320 AAACTTTTGCGACATGAGCTCGTACGTCTC 35349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449746963036080