Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq5719 84.2 8e-12 >seq5719 Length=28269 Score = 84.2 bits (92), Expect = 8e-12 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 || ||||||||| | || || || | | | ||||||||| || || || ||| || | Sbjct 20012 GAAATGGCGTTGCCACCTTGTCACATGTTTTGCCAATTCTACGTGGCGGACGGTGAGTTG 20071 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 || || || |||||||||| || ||||||||| | || ||||| ||||| |||||| Sbjct 20072 TCATGTCAAATGTATCAGCGTTCCGCCGACATGGGGCTTGGAGTTCCCTTTAATATTGCC 20131 Query 52227 AGCTATTCCTTGCTGACGC 52245 ||||| | |||| |||| Sbjct 20132 AGCTACGCGCTGCTTACGC 20150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190035533551460