Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq18532 113 1e-19 >seq18532 Length=6745 Score = 113 bits (124), Expect = 1e-19 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || || || ||||| | || ||||| || ||| Sbjct 5338 CAGATATTTGTGAAGACCTTGACGGGCAAGACCATCACGTTGGATGTGGAGCCGTCCGAC 5279 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || ||||||||||| ||||||||||| || |||||||| Sbjct 5278 ACGATTGACAATGTTAAGGCCAAAATTCAGGACAAGGAAGGAATCCCACCTGACCAGCAG 5219 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || ||||| || ||| || Sbjct 5218 CGTCTAATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACACTGGCCGACTACAACATC 5159 Query 178104 CAAAA 178108 ||||| Sbjct 5158 CAAAA 5154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203318084718484