Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq769 306 5e-78 seq8698 194 2e-44 >seq769 Length=28997 Score = 306 bits (338), Expect = 5e-78 Identities = 1198/1852 (65%), Gaps = 70/1852 (4%) Strand=Plus/Minus Query 78742 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGC 78801 ||| | ||||||| ||| ||||| || ||||||| ||| ||||| | || || ||| Sbjct 13905 GGTCTTGTACGTAAATAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGC 13846 Query 78802 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 78861 || |||| ||| | || || |||| || || | ||| | | |||||||||| Sbjct 13845 ATGGAGGTTAATTTACCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTGA 13786 Query 78862 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAA 78921 || || | || || | ||| || ||||| |||| || || ||||| ||||||||| Sbjct 13785 TCAATATATGCACCACGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCAT 13726 Query 78922 ATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCC 78977 | ||||| || || || | || |||| ||| | ||||| ||| |||| |||||| Sbjct 13725 ACCGTTTTGTATAAATCTTTGTAT-TCTTTTGGCAAGTTTGATACATTTTGAACGGATCC 13667 Query 78978 ACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAAC 79037 |||||| || ||||| || | ||| |||| | ||| | | ||||| | Sbjct 13666 ACCATCAGCGATAATTTGGTTACGTACATCTGGTGTCCAAATATTTAATTTGATTAAATC 13607 Query 79038 TCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGTGTAAA 79096 | | | | ||| ||||| || || |||||| || | | ||| | ||| |||| | Sbjct 13606 TTTCAATAAATGTTTGTTAAC-ACATGTAAATTCACCGGCAAGTACACGGCGATTGTACA 13548 Query 79097 TATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCG 79156 |||| || |||||||| | |||| || || |||| |||||| | || ||||| | Sbjct 13547 TATTGGAAGTGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGCAG 13488 Query 79157 TTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTA 79216 ||||||| ||||| || | ||| ||||| | ||| | | | |||| ||| | || Sbjct 13487 TTGGCATTGGTGCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATATTAGCGCGTA 13428 Query 79217 GAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATAC 79276 | ||||||||||| |||| || || || ||||| | ||| ||||| ||| | Sbjct 13427 ATCCTGCCCAATCCCAACGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAAATTC 13368 Query 79277 CGTTACTAGC--GTATGATCCTGTGTATGTTTCATAAGGTCCTTC-CTTTTCGGCTAATT 79333 | || || | | || ||| |||||||| || || || | ||| | || || Sbjct 13367 CTTTGCTTACTGGACTG--CCTTCGTATGTTTTGTATGGACCAAAACGTTTTGCCTC-TT 13311 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 |||| ||| ||||||| | | ||||| ||||| || || | || || | | Sbjct 13310 CACATGACGCACTTAATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAATTGCA 13251 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 ||| || |||| |||||||| | | ||||| || |||||||| ||||||| Sbjct 13250 ATGCAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTTGAA 13191 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || | ||| || ||||| |||||| || ||| |||||||||| | || || Sbjct 13190 CTCCTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGTAGA 13131 Query 79514 AATTAATATCTATAATTTTATTGAGATTCCT---GACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| |||| ||| | ||| | |||| | ||| || | || || Sbjct 13130 AATTTACATCAATAACACGATTCAAATTGATAGTGACTTGT-CTT--ACAATGTCAAATA 13074 Query 79571 G--TTTGAGAAAATCAAA------------TCGTCCATCTATTACAAACATGTTCA--AC 79614 |||| |||| | || ||||| || || | | ||| || | Sbjct 13073 ACATTTG-GAAATTGTAAACTGGCTTGTCCTCGTCGCTC-ATGTCCACCATTTTTGGTAA 13016 Query 79615 GC-GACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTC 79673 || || |||||| | |||||||| || | |||| || | | ||||| || || || Sbjct 13015 GCAGATAGATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTC 12956 Query 79674 AGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 79733 |||||| | ||||||| ||||| ||||| || ||||||||||| || ||||| Sbjct 12955 AGTGCATAAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACA 12896 Query 79734 CGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 79793 ||||| || || | ||| | || ||||| ||||||| ||| ||| || || ||| Sbjct 12895 TGCATCTTTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGAT---TTT 12839 Query 79794 ---CCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTT---TTCTCTTTCGTATTG 79847 ||| | || | || || | |||| | ||| |||| |||| ||||| Sbjct 12838 AAACCATAATTCTTGTGCACGTACGGTTC---TGTAACCCTTGCCTTCTTTTTCATATTG 12782 Query 79848 TGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACA--TTCGTCA 79905 || ||| |||||| | || ||||| ||||| || || || | | || Sbjct 12781 ATGGTACAATGCTTCGAATTTCTCACCCCA-----CGTCTCATGCAAATCACGTGCAACA 12727 Query 79906 ---GGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGA 79962 || || | ||| | ||| | |||||| | | ||| |||||||| || | ||| ||| Sbjct 12726 TTTGGGCAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGA 12667 Query 79963 ATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGC-TCCTCGTTTCCTGTATTCTTTT 80020 ||||| | || ||| || | ||| | | | ||| | || | || ||| |||| Sbjct 12666 ATCCACATTGC-ATAGAACAAATCGCGTGCACG-TGCATTTTCATCACCATGATTTTTTT 12609 Query 80021 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 80080 ||||||| | ||| | | | ||||| |||||| ||||||||||| || || | | | Sbjct 12608 TAAGATCTAAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAAC 12549 Query 80081 CCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 80140 | || ||| || || || |||| ||| | ||||| | ||| | ||||||| || Sbjct 12548 CTTTTCTTTTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGCA 12489 Query 80141 TTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 80200 |||| | ||| ||||| || ||||| || ||| ||| || |||||| | ||| | Sbjct 12488 TTGGGACAATTCCATTACTTGAGCCATTTGTACCGCGGATGTAACTTCCAGTACTACGGA 12429 Query 80201 TATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 80260 | || || | || || || || || |||| |||| || || ||||| Sbjct 12428 TGTTGTGAACACTCAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGATTTTA 12369 Query 80261 ACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACA 80320 |||||||||| || || | ||| |||||| |||| || | ||| || | || Sbjct 12368 ACGTATCATAAATACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGATGCCA 12309 Query 80321 TTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC--CATTT 80378 ||| | || || || ||||| || || || || | || || |||||| ||||| Sbjct 12308 ATTGTGGGCGTGGGGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATCATTT 12249 Query 80379 TTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTA 80437 | | || | || ||| || |||||| || ||||| | ||| ||||| || | Sbjct 12248 T--ACTCATCAAATCGTATGTGATAATAGCACTGTCGATATCTTCCTTG-TGAATACCAA 12192 Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497 | || |||||||| | ||| || || ||||||||||| || | |||||||||||||| Sbjct 12191 CTGCAACACGCATAATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTTTCAACA 12132 Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549 | || | ||| | ||||| |||||||| || | | || ||||| || Sbjct 12131 AATATGCACGTTCTAGCGTTTTGAAACCAAAGTAATCAAACGAGAAGTCACG 12080 >seq8698 Length=1787 Score = 194 bits (214), Expect = 2e-44 Identities = 623/950 (66%), Gaps = 35/950 (4%) Strand=Plus/Plus Query 49606 ATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGAG--ACATAACTC 49663 ||||| ||||||| ||| ||| | |||||| || | |||||||| | ||| | Sbjct 844 ATGTTCTTTTAAAAATCACAATCCAAAGAAAATTGTTGATCTTCTTCACTTACACCAACA 903 Query 49664 CCATTTTTTGG-TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGAT 49722 ||| ||||| ||||| || ||||||||||| ||||| || ||||| |||| ||| || Sbjct 904 CCAGCTTTTGAATATTCGCCTACACGTTTTTCAAAAAAGTTGGTTTTACCTTGCAAGGAG 963 Query 49723 ATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA 49782 || ||||||| |||| || || |||| |||| || ||||| | || ||| | Sbjct 964 ATCATTTCCATCCAATCGAATGGGTTGGATGCATTGTACATTTTAGATACACCTAATGCT 1023 Query 49783 GAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 49842 | ||| | ||| ||| ||||| || ||| ||||| | | ||||| || Sbjct 1024 TGTAACAAACGATCAGCGCAGAATTCAATGTATTGGCACATCAATGTTGAGTTCATGCCA 1083 Query 49843 ATAAGTTTAACTGGAA--GAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTG 49900 || | || |||||| | || | || | |||| ||| ||| || ||||||| Sbjct 1084 ATCAATTCAACTGGTAATGATTGGGAG--ACAAATACTTTTTCGATTTCAACCGCATTGC 1141 Query 49901 TTATAATAGATCTAACGGTTTCTTCACTCGGTG---GATGCAATAAATG---TTTAAACA 49954 || || || || ||||| || ||| ||| | |||||| ||| | | Sbjct 1142 CGATGATTGAATGAATCGTTTCCTCT---GGTAAACGATTTACTAAATGATCTTTGTATA 1198 Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014 || ||||||||||| || |||| ||| || || | ||| | |||||| ||||| Sbjct 1199 ATAAGCATGCGAAATCACAATGCAAACCTTCATCACGTGAAATCAATTCGTTTGAAAAAC 1258 Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCAGAA 50073 | || ||||| | ||||| ||||| | |||||| | || | || || || ||| Sbjct 1259 ATAAACCTGGCATCATACCACGTTTTTTTAACCAAAACACGG-CACAGAAGGAACCACTG 1317 Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA 50133 |||||||| ||||| || || || ||||| | | |||| | | ||| |||| Sbjct 1318 AAGAAGATACCTTCACACGCAGCGAATGCAACGACGCGCTCTGCGAACGATGCGTTGTCT 1377 Query 50134 T-GTA--TCCACTTTTGAGC-CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 || |||| ||| ||| || || || | ||| || ||||||| || ||| Sbjct 1378 GCGTTGGTCCAACGCA-AGCACCATTCTGCTTTTTCTTTGAC----GGCATCGATTGTAT 1432 Query 50190 G----GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 ||||| || | | ||||||| || || || ||||| || || || | Sbjct 1433 CAATAGCATTCAACAAACGCGTTTTTTCTGGACCATTACGAATGTAAGTGTCTATTAACA 1492 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 ||||| ||| | |||||| ||||| || || || ||||| || |||||||| | | Sbjct 1493 AGGAATACACTTCTGCATGAATATTTTCGATAGCGATTTGAAAGCCATAGAAACAACGTG 1552 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTA--AATTTTCATTCACTATTCC 50363 | || | | |||||||| | |||| ||||| | | ||||||| || || || || Sbjct 1553 CTTCAGGCACTTGCACTTCGTTGGAAAA--GTTCATCAACAAATTTTCGTTTACAATACC 1610 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423 ||| || || ||||| |||||||| | | || || | |||||| | | Sbjct 1611 GTCGGATGCAGCGAAAAATGCCAATACGTTGCTAATGAAGTAACGTTCGTTATCGCTCAT 1670 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 ||||| |||||| || ||||| | | |||| |||||| | ||||| || ||||| Sbjct 1671 TTTATCCCAATCTTTCGCATCTTGTGCCAAGTCTAACTCTTCCGCAGTCCAGAAAGATGC 1730 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAA 50533 || || ||||||||||| | ||| || |||| || ||| |||||||||| Sbjct 1731 TTCAGCTTTTTTATACATTTGCCAAATATCATTATGTTGAATTGGGAAAA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718186683919440