Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq810 100 2e-16 seq775 82.4 5e-11 >seq810 Length=26514 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGA--GTT 33212 || || || ||||| || || | |||||||| || ||||| ||| | || || || Sbjct 7730 CGTAATACTAAATGTAAAGTTGCTTCTTTTTGGATGTTGTAGTCA--CTAAGTGTACGTC 7673 Query 33213 GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTT 33272 || |||||||| || || ||| || | |||||| || || | || || ||||||| Sbjct 7672 CATCTTCCAATTGTTTACCTGCAAAGATAAGACGTTGTTGATCTGGTGGAATTCCTTCTT 7613 Query 33273 TTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTA 33332 | || |||| |||||||| ||| ||| || || |||| || || || || | Sbjct 7612 TGTCTTGAATCTTTTGTTTTACGTTTTCAATAGTATCAGATGGTTCTACATCAAGGGTGA 7553 Query 33333 TCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 | ||||| || || | |||||||||||||||||||||| Sbjct 7552 TGGTTTTACCAGTCAAAGTTTTTACGAAAATTTGCATG 7515 >seq775 Length=28483 Score = 82.4 bits (90), Expect = 5e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| || || ||| || | |||||| || || | || || |||||||| Sbjct 10618 TCTTCCAATTGTTTACCTGCAAAGATAAGACGTTGTTGATCTGGTGGAATTCCTTCTTTG 10559 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| ||||| || ||| ||| || || |||| || || ||||| || Sbjct 10558 TCTTGGATCTTTTGTTTAACGTTTTCAATAGTATCAGATGGTTCTACATCAAGAGTGATG 10499 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTA 33374 ||||| || || | ||||||||||||||||||||| ||| Sbjct 10498 GTTTTACCAGTCAATGTTTTTACGAAAATTTGCATGATTA 10459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318742066857108