Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq790 187 3e-42 >seq790 Length=27566 Score = 187 bits (206), Expect = 3e-42 Identities = 419/622 (67%), Gaps = 28/622 (5%) Strand=Plus/Plus Query 164388 ATTAAATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTAT 164447 ||||||| ||||| ||||||||| | ||||| ||| ||||||| || Sbjct 7071 ATTAAATATTGATTTTTTAGAAATGGGCATTGGTGGTTTAGGCAAAGAATTTAAAGAAAT 7130 Query 164448 TTTCAGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTG 164507 ||| | || ||||||||||| | | ||||| || | ||| |||| || || Sbjct 7131 TTTTCGTCGTGCATTTGCTTCACGTGTATATCCTAAAGATGTGATAGAAAAGTTGGGAAT 7190 Query 164508 TAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGC 164567 | |||| | ||||| ||||||||| | || || |||||||| || ||||||||||| || Sbjct 7191 TCGACATGTGAAAGGTATTTTATTATACGGTCCACCTGGTTGTGGGAAAACATTAATTGC 7250 Query 164568 TCGATGCATTGCTCAAGCTTTTAAATCGCGACCCGTTAAAATTGTTAATGGTCCTGAATT 164627 || |||| | |||| || ||| | | || |||||| | ||||| |||||| | Sbjct 7251 ACGTAAAATTGGTGAAGCATTGAAAGCAAGGCCGCCAAAAATTATCAATGGGCCTGAAAT 7310 Query 164628 ATTGAACAAATATGTAGGTGAGTCAGA--AGCTAAT--GTTAGAAAGTTGTTTCAGGAGG 164683 || || ||||| || |||| ||||| || ||| || | || ||| || || | Sbjct 7311 TTTAAATAAATACGTCGGTGGTTCAGAGGAGAAAATTCGTGAACAATTTG---CA-GATG 7366 Query 164684 CTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATG 164743 | ||||| ||| | | |||| ||| || | | |||||||| | ||| ||||||||| Sbjct 7367 CAGAAGAGGAATATAGGAAATTAGGGGAAGATTCTGAATTACATATCATTATTTTTGATG 7426 Query 164744 AGATAGATGCTCTTTGCAAAAAACGTGG-TGAT-----AATATTATTCATGATG----CA 164793 | || ||||| | || ||| ||||||| | || ||| | | || || || Sbjct 7427 AAATCGATGCAATATGTAAACAACGTGGATCATCCAGAGATAGCACTGGTGTTGGTGACA 7486 Query 164794 --GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAA 164851 || || ||||| |||||| | ||| |||||||||| || |||||||||||||| Sbjct 7487 ATGTTGTCAATCAATTGCTTGCAAAACTAGATGGTGTGGAGCAAGTAAATAATATTTTAG 7546 Query 164852 TTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGAT 164911 | | |||||||| || | ||| | || |||||||| || | || || ||| | | Sbjct 7547 TAATTGGTATGACAAATAGGAAAGATATGATCGATGATGCGTTGATGCGTCCAGGTAGGT 7606 Query 164912 TAGAATTGAAAATAGAAATAGGATTACCCGACAAA----GAAGGACGCCTTCAAATTTTA 164967 | ||| | ||| | ||||| ||||| || || || | ||||| ||||||||| Sbjct 7607 TGGAAGTAAAAGTTGAAATTGGATTGCCAGATGAATTTGGCAGGAC----ACAAATTTTA 7662 Query 164968 AAAGTTCATGTGGCTAAAATGA 164989 || ||||| | ||||||| Sbjct 7663 CAAATTCATACATCAAAAATGA 7684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595803876933600