Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq6389 93.3 4e-14 seq810 93.3 4e-14 >seq6389 Length=961 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 115297 TGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGG 115356 ||| ||||| | || |||||||| ||||| | || || ||| | ||||| || || Sbjct 228 TGTAAAAACTTTAACTGGAAAAACAATTACTCTAGATACAGAGGCAAGCGATACCATTTC 169 Query 115357 ACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTAT 115416 | || |||||||| || ||||||||||| | || || || ||| || | || Sbjct 168 GCGTGTGAAACAAAAGATCCAAGATAAAGAAGGGATTCCACCAGACCAACAACGATTGAT 109 Query 115417 TTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGA 115476 | || || |||||||||||||||| || | || |||||||| ||||||||||| Sbjct 108 ATTCGCAGGTAAACAATTAGAAGATGGACGTACATTAGCTGATTATAATATTCAAAAAGA 49 Query 115477 GTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| | ||| | || ||| | || || || || Sbjct 48 ATCTACGTTGCATTTAGTTTTGCGTTTACGTGGTGG 13 >seq810 Length=26514 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || ||||| | || || |||||||| ||| | || || ||| | Sbjct 7516 ATGCAAATTTTCGTAAAAACTTTGACTGGTAAAACCATCACCCTTGATGTAGAA-CCATC 7574 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| | | ||||||||||| ||| || |||||||| | || ||||| Sbjct 7575 TGATACTATTGAAAACGTAAAACAAAAGATTCAAGACAAAGAAGGAATTCCACCAGATCA 7634 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GACAAAACCATGGCCGATTATA 115463 ||| | ||||| | ||| || |||||||| |||||| ||| | | | | || || | Sbjct 7635 ACAACGTCTTATCTTTGCAGGTAAACAATTGGAAGATGGACGTACACTTAG-TGACTACA 7693 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 |||| |||||||| | ||| ||||| | || || Sbjct 7694 ACATCCAAAAAGAAGCAACTTTACATTTAGTATT 7727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425296588233520