Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq769 255 7e-63 seq8698 168 8e-37 >seq769 Length=28997 Score = 255 bits (282), Expect = 7e-63 Identities = 1190/1858 (64%), Gaps = 82/1858 (4%) Strand=Plus/Minus Query 61874 GGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGC 61933 ||| | ||||||| ||| ||||| || ||||||| ||| ||||| | ||||| ||| Sbjct 13905 GGTCTTGTACGTAAATAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGC 13846 Query 61934 ATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGA 61993 || |||| ||| | || || |||| || || | ||| | | |||||||||| Sbjct 13845 ATGGAGGTTAATTTACCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTGA 13786 Query 61994 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAA 62053 || || | || || | ||| || ||||| |||| ||| || ||||| ||||||||| Sbjct 13785 TCAATATATGCACCACGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCAT 13726 Query 62054 ATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCC 62109 | ||||| || || || | || |||| ||| | ||||| ||| |||| |||||| Sbjct 13725 ACCGTTTTGTATAAATCTTTGTAT-TCTTTTGGCAAGTTTGATACATTTTGAACGGATCC 13667 Query 62110 ACCATCTGCCATAATCCTATTC--TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAA 62167 |||||| || ||||| || | |||| | |||| | ||| | | ||||| Sbjct 13666 ACCATCAGCGATAATTTGGTTACGTACATCTGGTG--TCCAAATATTTAATTTGATTAAA 13609 Query 62168 ACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGTGTA 62226 || | | | ||| ||||| || || |||||| || | | ||| | ||| |||| Sbjct 13608 TCTTTCAATAAATGTTTGTTAAC-ACATGTAAATTCACCGGCAAGTACACGGCGATTGTA 13550 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286 ||||| || || ||||| | | | || || || |||| |||||| | || ||||| Sbjct 13549 CATATTGGAAGTGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGC 13490 Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCT--GATTTTATCT 62344 ||| ||||| ||||| || | ||| ||||| | ||| ||||||| ||| ||| | Sbjct 13489 AGTTGGCATTGGTGCAACTAGTAAGGAGTTTCTTACACC--ATGTTCTTTGATATTAGCG 13432 Query 62345 TTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGA 62404 || | |||||| |||| |||| || || || ||||| | Sbjct 13431 CGTAATCCTGCCCAATCCCAACGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAA 13372 Query 62405 ATACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTT--CCTTCTCAGCT 62461 || || || || | | || ||| | ||||| | |||||| || | || | || Sbjct 13371 ATTCCTTTGCTTACTGGACTG-CCTTCGTATGTTTTGTATGGACCAAAACGTTTT--GCC 13315 Query 62462 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 62521 |||||| ||| |||||| | | ||||| ||||| ||||| | || || | Sbjct 13314 TCTTCACATGACGCACTTAATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAA- 13256 Query 62522 TCTTGC---GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 62578 |||| || | |||| |||||||| | | ||||| || |||||||| Sbjct 13255 --TTGCAATGCAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAA 13198 Query 62579 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62638 |||||||| || | ||| || ||||| |||||| || || |||||||||| | Sbjct 13197 CCTTGAACTCCTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACC 13138 Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTT---TGACCACA 62695 || || |||| | ||| |||| ||| | ||| || | | |||| | || | Sbjct 13137 GGGTAGAAATTTACATCAATAACACGATTCAAATT---GATAGTGACTTGTCTTACAATG 13081 Query 62696 TCCT-TCAGTTTGAGAAAATCAAA------------TCGCCCATCTATTACAAACATGTT 62742 || | | || |||| | || ||| | || || | | ||| || Sbjct 13080 TCAAATAACATTTGGAAATTGTAAACTGGCTTGTCCTCGTCGCTC-ATGTCCACCATTTT 13022 Query 62743 CAAT--GCA-ACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTAT 62799 | ||| | |||||| | |||||||| || | |||| || | | ||||| || Sbjct 13021 TGGTAAGCAGATAGATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGAT 12962 Query 62800 TATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 62859 ||||||||||| | |||||||| || || ||||| || ||||||||||| || Sbjct 12961 GATCTCAGTGCATAAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACG 12902 Query 62860 GTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 62919 ||||| ||||| || || | ||| |||| ||||| ||||||| ||| ||| || || Sbjct 12901 ATTACATGCATCTTTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGAT 12842 Query 62920 CGCTTT---CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTC 62973 ||| ||| | || | || || | | |||| | ||| |||| |||| Sbjct 12841 ---TTTAAACCATAATTCTTGTGCACGTACGGT---TCTGTAACCCTTGCCTTCTTTTTC 12788 Query 62974 GTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTC 63033 ||| | |||||| |||||| | || ||||| | | || || | | Sbjct 12787 ATATTGATGGTACAATGCTTCGAATTTCTCACCCCACGTCTCATGCAAATCACGTGCAAC 12728 Query 63034 ATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGG 63093 || || || | ||| | ||| | ||| || | | || |||||||| || | ||| || Sbjct 12727 ATTTGGGCAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGG 12668 Query 63094 AATCCAAAGAGCTATA-AATAGATCTC-TG---GTTCTATGTTCCTCGTTTCCTGTATTC 63148 |||||| | || ||| || | ||| | || || | || ||| || | || ||| Sbjct 12667 AATCCACATTGC-ATAGAACAAATCGCGTGCACGTGC-ATTTTCATCAC--CATG-ATTT 12613 Query 63149 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63208 ||||||||||| | ||| | | | ||||| |||||| ||||||||||| || || | | Sbjct 12612 TTTTTAAGATCTAAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAA 12553 Query 63209 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63268 || | ||| || || || |||| ||| | ||||| | ||| | |||||| Sbjct 12552 GAACCTTTTCTTTTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTC 12493 Query 63269 AACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCA 63328 | |||||| | ||| ||||| || ||||| || || ||| || |||||| | | Sbjct 12492 AGCATTGGGACAATTCCATTACTTGAGCCATTTGTACCGCGGATGTAACTTCCAGTACTA 12433 Query 63329 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63388 || || || || | || || || || || |||| |||| || || | Sbjct 12432 CGGATGTTGTGAACACTCAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGAT 12373 Query 63389 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 63448 |||||||||||||| || || | || |||||| |||| || | ||| || Sbjct 12372 TTTAACGTATCATAAATACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGAT 12313 Query 63449 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC--C 63506 | || ||| | || || || ||||| || || || || | || || |||||| | Sbjct 12312 GCCAATTGTGGGCGTGGGGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATC 12253 Query 63507 ATTTT--TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAA 63563 ||||| ||| || || ||| || |||||| ||| ||||| | ||| |||| Sbjct 12252 ATTTTACTCATCAA----ATCGTATGTGATAATAGCACTGTCGATATCTTCCTTG-TGAA 12198 Query 63564 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63623 | || ||||| |||||||| | ||| || || ||||||||||| || | ||||||| Sbjct 12197 TACCAACTGCAACACGCATAATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTT 12138 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63681 ||||||| || | ||| | ||||| |||||||| || | | || ||||| || Sbjct 12137 TCAACAAATATGCACGTTCTAGCGTTTTGAAACCAAAGTAATCAAACGAGAAGTCACG 12080 >seq8698 Length=1787 Score = 168 bits (186), Expect = 8e-37 Identities = 612/944 (65%), Gaps = 23/944 (2%) Strand=Plus/Plus Query 32307 ATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGAG--ACATAACTC 32364 ||||| ||||||| ||| ||| | |||||| || | ||||||| | ||| | Sbjct 844 ATGTTCTTTTAAAAATCACAATCCAAAGAAAATTGTTGATCTTCTTCACTTACACCAACA 903 Query 32365 CCATTTTTTGG-TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGAT 32423 ||| ||||| ||||| || ||||||||||| ||||| || |||||||||| || || Sbjct 904 CCAGCTTTTGAATATTCGCCTACACGTTTTTCAAAAAAGTTGGTTTTACCTTGCAAGGAG 963 Query 32424 ATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA 32483 || ||||||| |||||||||| |||| |||| || ||||| | || ||| | Sbjct 964 ATCATTTCCATCCAATCGAATGGGTTGGATGCATTGTACATTTTAGATACACCTAATGCT 1023 Query 32484 GAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 32543 | ||| | ||| ||| ||||| || ||| ||||| | | ||||| || Sbjct 1024 TGTAACAAACGATCAGCGCAGAATTCAATGTATTGGCACATCAATGTTGAGTTCATGCCA 1083 Query 32544 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 32603 || | || |||||| | | | | |||| ||| ||| || ||||| | Sbjct 1084 ATCAATTCAACTGGTAATGATTGGGAGACAAATACTTTTTCGATTTCAACCGCATTGCCG 1143 Query 32604 ATAATAGATCTTACTGTTTCTTCACTCGGTG---GATACAATAAATG---TTTAAACATC 32657 || || || | ||||| || ||| ||| | |||||| ||| | | Sbjct 1144 ATGATTGAATGAATCGTTTCCTCT---GGTAAACGATTTACTAAATGATCTTTGTATAAT 1200 Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717 || ||||||||||| || || | ||| || || | ||| |||||||| ||||| Sbjct 1201 AAGCATGCGAAATCACAATGCAAACCTTCATCACGTGAAATCAATTCGTTTGAAAAACAT 1260 Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAA 32776 | || ||||| | ||||| ||||| | |||||| | || | || || || ||| || Sbjct 1261 AAACCTGGCATCATACCACGTTTTTTTAACCAAAACACGG-CACAGAAGGAACCACTGAA 1319 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 32835 ||| || ||||| || || || |||| | | |||| | | ||| |||| Sbjct 1320 GAAGATACCTTCACACGCAGCGAATGCAACGACGCGCTCTGCGAACGATGCGTTGTCTGC 1379 Query 32836 GTA--TCCACTTTTGAGC-CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 32892 || |||| ||| ||| || || || | ||| || | ||||| || |||| Sbjct 1380 GTTGGTCCAACGCA-AGCACCATTCTGCTTTTTCTTTGACGGCATCGATTGTATCAATAG 1438 Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 32952 |||| || | | ||||||| || || || || || || || || | || Sbjct 1439 CATTCAACAAACGCGTTTTTTCTGGACCATTACGAATGTAAGTGTCTATTAACAAGGAAT 1498 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 ||| ||| | |||||| ||||| || || |||||||| || ||||| || | || || | Sbjct 1499 ACACTTCTGCATGAATATTTTCGATAGCGATTTGAAAGCCATAGAAACAACGTGCTTCAG 1558 Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTA--AATTTTCATTCACTATTCCGTCACT 33070 | || ||||| | |||| |||| | | ||||||| || || || ||||| Sbjct 1559 GCACTTGCACTTCGTTGGAAAA--GTTCATCAACAAATTTTCGTTTACAATACCGTCGGA 1616 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33130 || || ||||| |||||||| | | || || || ||||| | | ||||| Sbjct 1617 TGCAGCGAAAAATGCCAATACGTTGCTAATGAAGTAACGTTCGTTATCGCTCATTTTATC 1676 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 |||||| || ||||| | | || | |||||| | ||||| || ||||| || || Sbjct 1677 CCAATCTTTCGCATCTTGTGCCAAGTCTAACTCTTCCGCAGTCCAGAAAGATGCTTCAGC 1736 Query 33191 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGaaaaa 33234 ||||||||||| | ||| || |||| || ||||||||| |||| Sbjct 1737 TTTTTTATACATTTGCCAAATATCATTATGTTGAATTGGGAAAA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633559560021600