Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq810 167 2e-36 seq775 132 4e-26 seq2305 129 5e-25 seq6389 125 6e-24 seq734 125 6e-24 seq4707 122 7e-23 seq4160 118 9e-22 seq1282 116 3e-21 seq3001 100 2e-16 seq769 100 2e-16 >seq810 Length=26514 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || |||||||| |||| ||||| || ||| | | Sbjct 7516 ATGCAAATTTTCGTAAAAACTTTGACTGGTAAAACCATCACCCTTGATGTAGAACCATCT 7575 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | |||||||| ||||||||||| || || |||||||| |||||| Sbjct 7576 GATACTATTGAAAACGTAAAACAAAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAA 7635 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || ||||| || || ||| || || | || |||||| Sbjct 7636 CAACGTCTTATCTTTGCAGGTAAACAATTGGAAGATGGACGTACACTTAGTGACTACAAC 7695 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||||||| | || |||||||||| || || | || ||||| Sbjct 7696 ATCCAAAAAGAAGCAACTTTACATTTAGTATTACGTCTTCGTGGAGG 7742 >seq775 Length=28483 Score = 132 bits (146), Expect = 4e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || |||||||| |||||||||| || ||| | | Sbjct 10464 ATGCAAATTTTCGTAAAAACATTGACTGGTAAAACCATCACTCTTGATGTAGAACCATCT 10523 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | |||||||| || |||||||| || || |||||||| |||||| Sbjct 10524 GATACTATTGAAAACGTTAAACAAAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAA 10583 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 ||||||||||| ||||| || ||||| || || ||| Sbjct 10584 CAACGTCTTATCTTTGCAGGTAAACAATTGGAAGAT 10619 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 |||||||| ||||||||||||||||| ||||| || ||||| || || ||| || ||| Sbjct 10704 ATTCCACCAGATCAACAACGTCTTATCTTTGCAGGTAAACAATTGGAAGATGGACGTACC 10763 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443 | || ||||| || || ||||||||| | ||| |||||||||| | || || || ||| Sbjct 10764 CTTTCTGATTATAATATCCAAAAAGAAGCAACCTTACATTTAGTACTTCGTTTACGTGGA 10823 Query 22444 GG 22445 || Sbjct 10824 GG 10825 >seq2305 Length=8964 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22237 ACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATC 22296 || || || || ||||| |||| ||||| || ||| | | ||||| | || | | Sbjct 1336 ACATTGACTGGGAAAACCATCACGCTTGATGTAGAACCGTCTGATACTATTGAAAACGTT 1395 Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356 ||||||||||| ||||| || || ||||| ||||| |||||||||||| | |||||||| Sbjct 1396 AAACAAAAAATACAAGATAAAGAAGGTATCCCACCAGATCAACAACGTTTGATATTTGCA 1455 Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||||| || || ||| || || | || ||||| |||||||||||| | || Sbjct 1456 GGCAAACAATTGGAAGATGGGCGTACACTTAGTGACTACAATATTCAAAAAGAAGCAACA 1515 Query 22417 ATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | ||||||||||| |||| || || || Sbjct 1516 TTGCATTTAGTTTTAAGATTACGTGGTGG 1544 >seq6389 Length=961 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 22230 TGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGA 22289 ||| ||||||||||| || ||||| | ||||| || || | | ||||||| | Sbjct 228 TGTAAAAACTTTAACTGGAAAAACAATTACTCTAGATACAGAGGCAAGCGATACCATTTC 169 Query 22290 CGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTAT 22349 | | |||||||| || ||||| || || || |||||||| || |||||||| | || Sbjct 168 GCGTGTGAAACAAAAGATCCAAGATAAAGAAGGGATTCCACCAGACCAACAACGATTGAT 109 Query 22350 ATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 ||| || || ||||| ||||| ||| || || | | ||||| || ||||||||||| Sbjct 108 ATTCGCAGGTAAACAATTAGAAGATGGACGTACATTAGCTGATTATAATATTCAAAAAGA 49 Query 22410 ATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || | |||||||||||||| || || || ||| Sbjct 48 ATCTACGTTGCATTTAGTTTTGCGTTTACGTGGTGGT 12 >seq734 Length=33368 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||| || ||||| ||||| || || |||||||| |||||||| || | | Sbjct 10313 AGATGACGATATTTGTAAAAACCTTGACTGGTAAAACCATCACTCTTTTTGTTCCTTCAA 10372 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | ||||| | || ||| ||| |||||| ||||| || || ||||||||||| |||| Sbjct 10373 CAGATACAATTGAAAATACAAAATTAAAAATACAAGATAAAGAAGGTATTCCACCAGATC 10432 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 |||||||| | |||||||| || || || |||| ||| || || | |||||||| | Sbjct 10433 AACAACGTTTGATATTTGCAGGTAAGCAACTAGAAGATGGTCGTACATTATCCGATTATA 10492 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | || ||| | ||| || | |||||||| || || ||||| ||||| Sbjct 10493 ATATACAAGAGGAAGCCGTATTGCATTTAGTATTACGTTTGCGTGGAGG 10541 >seq4707 Length=625 Score = 122 bits (134), Expect = 7e-23 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 |||| ||||| || |||||||| || || ||||| || ||||||||||||||||| |||| Sbjct 252 TCAAGCAAAAGATCCAAGACAAAGAAGGAATTCCTCCAGATCAACAACGTCTTATCTTTG 311 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 | || ||||| || || ||| || || | || ||||| || || ||||||||| | | Sbjct 312 CTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAATATCCAAAAAGAAGCAA 371 Query 22415 CCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || | |||||||| ||||| || || || ||| Sbjct 372 CCCTTCATTTAGTATTGCGTTTACGTGGTGGT 403 >seq4160 Length=5066 Score = 118 bits (130), Expect = 9e-22 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22226 TTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCG 22285 ||||||||||||||||||| |||||||| |||||||||| || ||| | | ||||| Sbjct 874 TTTTTGTTAAAACTTTAACTGGTAAAACCATCACTCTTGATGTAGAACCATCTGATACAA 933 Query 22286 TGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTC 22345 | | |||| ||||||||||| ||||| || || ||||| || || | |||||||||| Sbjct 934 TTGCAAATATAAAACAAAAAATACAAGATAAAGAAGGTATCCCTCCAGGTCAACAACGTT 993 Query 22346 TTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAA 22405 | |||| ||| || ||| || || ||| ||| || | || | | | Sbjct 994 TGATATATGCGGGACTACAATTGGAAGATTGGAAGTGCGTAAGTGAATGCATATTATATA 1053 Query 22406 AAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | ||| || ||||||||||| || || ||||||||||| Sbjct 1054 AGGAACAAACGATACATTTAGTATTACGTTTGCGCGGAGG 1093 >seq1282 Length=23488 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | ||||||||||| || || |||||||| ||||| | || || | | Sbjct 1073 ATGCAATTCTTTGTTAAAACGTTGACTGGTAAAACAATCACTTTGGACGTATTACAAAAT 1132 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| | ||| ||| |||||| | || || || |||||| |||||| Sbjct 1133 GAATTGATTGCAGATGTAAAATTAAAGATTCAAAAGAAAGAAGGATGTCCACCAGATCAA 1192 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| |||| ||||| || | || || || ||| || || | |||||||||||| Sbjct 1193 CAACGAATTATTTTTGCAGGTTATCAATTGGAAGATACGCGTACATTATCCGATTACAAC 1252 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||||||| | ||| | |||||||| || ||| | || ||||| Sbjct 1253 ATTCAAAAAGAAGCTACCGTCCATTTAGTATTACGACTTCGTGGAGG 1299 >seq3001 Length=6688 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 22206 TACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGA 22265 ||||| |||||||||| ||||||||||||| ||||| || || ||| ||| | || Sbjct 4229 TACATAGATAAAGATGCAGATTTTTGTTAAAAATTTAAGAGGCAAGACGACCACCTTGGA 4288 Query 22266 AGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTAT 22325 |||| | | | || || || || || | || || | ||||||||| || || ||||| Sbjct 4289 TGTGGTAGCGTCTGACACTGTTGAAAATGTTAAGCAGAGAATTCAAGAAAAAGAAGGTAT 4348 Query 22326 TCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGT 22385 | || ||||||| | | || |||| || ||||| || || ||| |||| | Sbjct 4349 CGCTCCAAGTCAACAAATTTTAATCCTTGCTGGGAAACAATTGGAAGATACTTGCACTTT 4408 Query 22386 CTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| ||| |||||||| Sbjct 4409 GTCTGATTACAATATTGAAAAAGAA 4433 >seq769 Length=28997 Score = 100 bits (110), Expect = 2e-16 Identities = 944/1497 (63%), Gaps = 97/1497 (6%) Strand=Plus/Minus Query 128778 CTTG-TCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGC 128836 |||| || || || |||||||| || || || || | || || ||||| ||||| | Sbjct 13940 CTTGATCAACCGTGAATTTAATTGCATCTGCCTTTGGTCTTGTACGTAAATAATACATAC 13881 Query 128837 CTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAA-----CAATGCGTA 128891 | ||||| ||||| ||||||| | | | ||| || | ||| || || ||| | Sbjct 13880 CGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGCATGGAGGTTAATTTACCAGTGCTT- 13822 Query 128892 GGTGGGTTGACTCaaaaaa-aTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGAT 128950 |||| || ||| | ||| || |||||||||||||||| | | || || | Sbjct 13821 GGTGC--TG---CAATGTGTACATTTAAACTTTGACTTTGATCAATATATGCACCACGGT 13767 Query 128951 CGGCAGCCATACCAATCAAA--TTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTC 129008 | || |||||| | | | ||||| ||| |||||||| ||||||||||| | || Sbjct 13766 CAGCTGCCATATTTAAAATAGTTTTTTGACTA--ATTTCCCATACCGTTTTGTATAAATC 13709 Query 129009 TCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTT 129068 | | | |||||| | | | | || || ||| || | || ||||||| Sbjct 13708 TTTGTATTCTTTTGGCAAGTTTGATACATTTTGAACGGATCCACCATCAGCGATAATTTG 13649 Query 129069 GTTTCG--CATCTGTTCGTTGTACAAAT--TCAGTTTGATCAAATCGTCGGTCAAGTATT 129124 ||| || |||||| | || ||||| | | |||||| ||||| | |||| || Sbjct 13648 GTTACGTACATCTGGT----GTCCAAATATTTAATTTGATTAAATCTT---TCAA-TAAA 13597 Query 129125 TGTTTATTA---CTTG-AAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTG 129180 ||||| ||| | || ||| ||||| || | || || ||| ||| || ||| ||| Sbjct 13596 TGTTTGTTAACACATGTAAATTCACCGGCAAGTACACGGCGATTGTACATATTGGAAGTG 13537 Query 129181 AACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAA 129240 | || ||||| |||| |||||||| | ||||| | || | || || ||||| Sbjct 13536 TATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGCAGTTGGCATTGGT 13477 Query 129241 GCCACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAG 129300 || || | ||||||| | ||| || | ||| || | |||| || ||| Sbjct 13476 GCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATATTAGCGCGTAATCCTGCCCAA 13417 Query 129301 TCCCACATCGATGTGGGTGTGTGA--TTCCACAAGTCGTATTGCAATATACCCAAACTGG 129358 ||||| |||| | | |||| ||||||| || ||| || || || || Sbjct 13416 TCCCAA--CGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAAATTCCTTTGCTTA 13359 Query 129359 CGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCA--ACTCGC 129416 | |||||| ||| | | || || || ||||||| ||| || || | | Sbjct 13358 CTGGACTGCCTTCGTATGTTTTGTATGGACCAAAACGTTTTGCCTCTTCACATGACGCAC 13299 Query 129417 TTCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAA---CACTTTGGCCTG 129473 || ||||| |||| ||||| ||||| || | ||||||| || | || || Sbjct 13298 TT--AATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAATTGCAATGCAGC-TG 13242 Query 129474 GTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCAC 129533 | |||||| | ||||| |||| |||| ||||| || || |||||||||| || | Sbjct 13241 G--GCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTTGAACTCCTAA 13184 Query 129534 ACCGATGGGTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGAT 129593 ||| || |||| ||| | ||||| | || || | || ||| | || | Sbjct 13183 ACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGTAGAAATTTAC 13124 Query 129594 GTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTAC---GTATTTTAACATTTC 129650 || |||| || ||||| | || || || |||| || |||||||| Sbjct 13123 ATCAATAACACGATTCAAATTGATAGTGAC--TTGTC-TTACAATGTCAAATAACATTTG 13067 Query 129651 AAAATTGTA------CTCGCCTACATCG---ATGTCGACAAATTGATTGACA--CAAATC 129699 |||||||| || | | | ||| ||||| || | || ||| | || || Sbjct 13066 GAAATTGTAAACTGGCTTGTCCTCGTCGCTCATGTCCACCATTT--TTGGTAAGCAGATA 13009 Query 129700 GAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCAC 129759 || || || || || || ||| |||| | || | || |||| || || | ||| Sbjct 13008 GATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTCAGTGCAT 12949 Query 129760 AAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCT 129819 ||||||||| ||||||| || ||||| | | |||||| ||| || || |||||| Sbjct 12948 AAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACATGCATCT 12889 Query 129820 TTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC--- 129876 ||||||| |||||| ||||| || ||||| ||||| ||| ||||| | | ||| Sbjct 12888 TTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTT---CAATGATTTTAAACCAT 12832 Query 129877 AAGTCTCGAGC-CTT---GATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATA 129932 || ||| | || | | | ||||| | ||||| ||| || ||| || Sbjct 12831 AATTCTTGTGCACGTACGGTTCTGT----AACCCTTGCCTTCTTTTTCATATTGATGGTA 12776 Query 129933 CAGTTGTTC-AAATTCTGAGCCGTGTACGGTGTCGAGCA----ACG-GCGATTCACGCGG 129986 || | ||| || |||| | || || || || ||| ||| || | || || Sbjct 12775 CAATGCTTCGAATTTCTCACCC---CAC-GTCTCATGCAAATCACGTGCAA--CATTTGG 12722 Query 129987 ACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCA 130046 || | ||| |||| |||||| |||| || |||||||| || ||||| || | ||| Sbjct 12721 GCAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGAATCCA 12662 Query 130047 CAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATG-TTACGTTTCAGTT 130105 || || || |||||||| || || | || || || ||||| || ||| || | Sbjct 12661 CATTGCATAGAACAAATCGCGTGCACGTGCATTTTCATCA-CCATGATTTTTTTTAAGAT 12603 Query 130106 CAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCC 130165 | | || ||| | | || || ||||| ||||| | ||||| || | | || || | Sbjct 12602 CTAAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAACCTTTTC 12543 Query 130166 GTTT---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTG 130219 ||| ||| |||||||| |||| || ||| || ||| | |||| || ||||| Sbjct 12542 TTTTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGCATTG 12486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419681214231490