Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6389 91.5 2e-13 >seq6389 Length=961 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039 |||| || | ||||||||| || |||||||| || || ||||||||||| ||||||| Sbjct 11 GACCACCACGTAAACGCAAAACTAAATGCAACGTAGATTCTTTTTGAATATTATAATCAG 70 Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099 | | || || | || |||| || ||||| |||||||| | ||| || ||||| | || Sbjct 71 CTAATGTACGTCCATCTTCTAATTGTTTACCTGCGAATATCAATCGTTGTTGGTCTGGTG 130 Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | | || || || ||| |||||||| | || | || ||||| | || Sbjct 131 GAATCCCTTCTTTATCTTGGATCTTTTGTTTCACACGCGAAATGGTATCGCTTGCCTCTG 190 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 ||| | || || ||||| || |||| || |||||| Sbjct 191 TATCTAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACA 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543150697196640