Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq810 123 6e-23 seq775 96.9 8e-15 >seq810 Length=26514 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| |||||||||| | || | ||||||||||| || || || || ||| Sbjct 7706 TCTTTTTGGATGTTGTAGTCACTAAGTGTACGTCCATCTTCCAATTGTTTACCTGCAAAG 7647 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || ||||| || || || || |||||||||| || ||||||||||| || ||| | Sbjct 7646 ATAAGACGTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGAATCTTTTGTTTTACGTTT 7587 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | || || | || ||||||||| | ||||| || ||||| || | |||||| || Sbjct 7586 TCAATAGTATCAGATGGTTCTACATCAAGGGTGATGGTTTTACCAGTCAAAGTTTTTACG 7527 Query 199619 AAAATTTG 199626 |||||||| Sbjct 7526 AAAATTTG 7519 >seq775 Length=28483 Score = 96.9 bits (106), Expect = 8e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||| || || || || ||||| ||||| || || || || ||||||||| Sbjct 10622 TCCATCTTCCAATTGTTTACCTGCAAAGATAAGACGTTGTTGATCTGGTGGAATTCCTTC 10563 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 | || || |||||||| || ||| ||| | || || | || ||||||||| | || Sbjct 10562 TTTGTCTTGGATCTTTTGTTTAACGTTTTCAATAGTATCAGATGGTTCTACATCAAGAGT 10503 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || | ||||| || |||||||| Sbjct 10502 GATGGTTTTACCAGTCAATGTTTTTACGAAAATTTG 10467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178783450282782