Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq743 508 7e-139 seq769 260 2e-64 seq675 156 5e-33 seq2286 147 3e-30 seq810 136 5e-27 seq2241 132 6e-26 seq633 107 2e-18 seq1642 100 4e-16 seq620 96.9 4e-15 seq2390 82.4 1e-10 >seq743 Length=31837 Score = 508 bits (562), Expect = 7e-139 Identities = 1072/1583 (68%), Gaps = 22/1583 (1%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 ||||||||| |||| || ||||| || || ||||| ||||| ||||| | || Sbjct 15264 TTCATCTTCCGCTTTGTATTTTTCTGCTTCAGCAACCATACGTTCAACTTCTTCGCTTGA 15323 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTT 6686 || | || ||||| || || || ||||| || || | | || | || || || Sbjct 15324 TAGACGACCTTTATCGTTGGTGATGGTAATTTTGTTTTCACGT-CCAGTGGATTTTTCAA 15382 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 | ||||||||||| ||||||||||||||||| | |||| | | || | ||||| || Sbjct 15383 CTGCACTTACATTTAAAATACCATTTGCATCGATATCGTAGGTAACCTCGATTTGAGGAA 15442 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 ||| | || | ||| ||||| |||| ||| |||| | || | ||| Sbjct 15443 CACCACGTGGCATTGGTGGGATACCGTCCAAATGGAATTTACCCAACAAGTTACAATCTT 15502 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | | | | |||||||||||| | |||| || || ||||||| || ||| Sbjct 15503 TGGTCATTGCACGTTCACCTTCGAAAACTTGGATCAATACACCAGGTTGGTTGTCTGCAT 15562 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || ||| |||| ||| || | ||| | ||| |||||||| || | | || Sbjct 15563 ATGTACTGAAAGTTTGACTTTTTTTCGTTGGTACCGTGGTATTTCTTTTGATCAATGCGG 15622 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| | |||||| |||||| | || | | || || || || ||||| | ||| | Sbjct 15623 TCATGACACCACCAGCAGTTTCAATACCTAAACTCAATGGAGTAACATCCAACAATAATA 15682 Query 6987 GGTCTTGAACAGATTCGTTCCCTT-CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || | | || | || | |||| |||| || || ||||| || || || ||| Sbjct 15683 AATCATCCA-AGTTGGAATCTTGTACACCACTTAAAATTGCAGCTTGCACGGTTGCACCG 15741 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 |||| || || ||||| ||||| || || | || | ||||| || || ||| | | Sbjct 15742 AATGCTACAGCTTCATCTGGGTTGATGCTTCTGTTTGGCTCTTTGCCATTGAAAAATTGT 15801 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 ||||| ||| | ||| ||||| ||||| ||||| ||||| || | ||||| | Sbjct 15802 TTCAACATAGATTGCAATTTTGGGATACGTGTACTACCACCAACCAATACAACTTCATCC 15861 Query 7166 ACTTTCGATTTATCGA--TCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 || |||| | | || | |||| || || | ||| || || || || | ||||| Sbjct 15862 ACA--CGATCTTTGGAGATTTTTGCATCACGCAAAACTTTCTCAACTGGCTCTAAACATT 15919 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 ||||||| | ||||| || || || |||||||||||||| |||| | | ||||| Sbjct 15920 TACGGAAATAATCCATGTTCATCTCTTCGAAACGTGCACGGGTGATGGTGGATTGGAAAT 15979 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| |||||| | || || ||||||||||| || ||||| | || || ||||||| Sbjct 15980 CAATGCCGTCAAACAAGGAGTCAATTTCAATATATGCTTGTGTGGAAGAGGACAACGTTC 16039 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||||| | ||||| | || ||||||||||| | ||||| ||| |||| | Sbjct 16040 TCTTTGCTCTTTCACATGAGGTACGTAAACGACGTAATGCACGTTCGTTTTTAGAAAGGT 16099 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 |||| ||| ||| | ||| || ||| ||| || || | | |||||||| Sbjct 16100 CTTTTCTATTTTTTCTTTTGAATTCTGTTTTGAAATGATCAACCATACGATTATCGAAAT 16159 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 ||||||| || || || |||||||| || || |||||||||||||| ||||| |||||| Sbjct 16160 CTTCACCGCCTAAATGGGTATCCCCAGCAGTTGCTTTGACTTCAAAAATACCATCTTCAA 16219 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | ||||| || |||||||| ||||||||||| | || || || | ||||||| | | Sbjct 16220 TGGTCAACAAGGATACATCAAATGTACCACCACCTAAATCGAAGATCAATACGTTCTTTT 16279 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | || || || || | ||| || || || || || || || ||||| ||||||| Sbjct 16280 CACCACCT---TTTTTGTCCAAACCATATGCAATCGCTGCTGCTGTAGGTTCGTTAATAA 16336 Query 7644 TACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 |||| || ||| ||||| || | |||||| | |||||||| || ||||| | ||| || Sbjct 16337 TACGTAAAACA-TTCAGACCGGAAATAGTACCAGCATCTTTTGTTGCTTGCCTTTGGGAG 16395 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || || || ||||| || || | || || | || | | || || || | | Sbjct 16396 TCATTGAAATATGCCGGTACGGTAATAACAGCAGAATTAACGTCGGTTCCAAGGTATGCT 16455 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || | | ||||||||||| | ||||| | ||| ||||| || |||| | | Sbjct 16456 TCAGCTACGTTCTTCATTTTGGTCAATACCATAGCACTAATTTCTTCTGCACCAAATTCT 16515 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC-AGCACCGGGGATAAC 7881 || ||||||| || | | ||||||||||| ||||| ||| | | ||| | || Sbjct 16516 TTGCTTTCACCTTTGTATTGGACTTCAATCATTGGTTT-TCCACTTGGACCTTTTTTCAC 16574 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTC--CGAAAACTTTCTTCCG 7939 || | | ||||| ||||||||| | ||| || | | | || ||||| || | ||| Sbjct 16575 TGTAAATGGCCAATGTTTCATATCTTTTTGTACATCTGGATCATCGAAA--TTACGTCCA 16632 Query 7940 ATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCC 7999 || | || |||||||| ||||| ||||| |||||||| | | ||| || || || Sbjct 16633 ATCAATCGTTTTGCATCGAAAACGGTGTTCAATGGGTTCATTGATACTTGATTTTTTGCT 16692 Query 8000 GCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGA 8059 || | ||||| | |||||| | || || || || || || |||||||| |||| Sbjct 16693 GCATTACCGATTAAACGTTC---AGAGTCAGTGAAAGCAACATATGATGGGGTAGTTCTG 16749 Query 8060 TTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAA 8119 | ||||||||||| ||||||||||| || ||| |||| ||| | || || || ||| Sbjct 16750 GTACCTTGGTCGTTGGCAATAATTTCAACTTGGTTATTTTTCCATGCACCTACACATGAA 16809 Query 8120 TACGTTGTTCCTAAATCAATACC 8142 || ||||| |||||||||||||| Sbjct 16810 TAGGTTGTACCTAAATCAATACC 16832 >seq769 Length=28997 Score = 260 bits (288), Expect = 2e-64 Identities = 1177/1838 (64%), Gaps = 63/1838 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||||||||| ||||||||||| ||||||| || || | |||||| || | | ||| Sbjct 13890 TAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGCATGGAGGTTAATTTA 13831 Query 104428 GAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACACCT 104487 | | |||| | | | || || | |||||||||||| || ||||| |||| Sbjct 13830 CCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTGATCAATATATGCACCA 13771 Query 104488 CTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAAT 104547 | || || ||||||| | || ||||||||||| ||||||||||| ||||| || || Sbjct 13770 CGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCATACCGTTTTGTATAAA 13711 Query 104548 TCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACC-AT 104606 || || || | || | | | |||||||| || ||| || ||| | || Sbjct 13710 TCTTTGTATTCTTTTGGCAAGTTTGATACATTTTGAACGGATCCA----CCATCAGCGAT 13655 Query 104607 AAGATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTT-------TCAAATCGTTTACTA 104659 || ||| || | | | | | ||||| | || | ||||| || | || Sbjct 13654 AA----TTTGGTTACGTACATCTGGTGTCCAAATATTTAATTTGATTAAATCTTTCAATA 13599 Query 104660 AATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCG 104719 |||||||||| || ||||||||| || ||| || | || ||||||| | Sbjct 13598 AATGTTTGTTAACACATGTAAATTCACCGGCAAGTACACGGCGATTGTACATATTGGAAG 13539 Query 104720 TATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAG 104779 | || ||||| ||||| |||||||| || | ||| || || || ||||| || ||||| | Sbjct 13538 TGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGCAGTTGGCATTG 13479 Query 104780 GTGCAAGAAG-AAGACTATTCATAGTTCCT-TTCTTAACAAGTTTACGCATGGCATTCCA 104837 |||||| || ||| ||| || | | ||||| | || ||| | | ||| Sbjct 13478 GTGCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATA-TTAGCGCGT---AATCCT 13423 Query 104838 ATCGTATCGACCACTAAACTTTGG-GTCTCGATCCCACATATCGAATTGAAGAATACCTT 104896 | ||| | || | ||| || || ||| ||||||| ||| | ||| |||| Sbjct 13422 GCCCAATCC-CAACGATCGGATGGAGTGACGTTCC-ACATATCTGGTTGTAAAATTCCTT 13365 Query 104897 TACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACACG 104956 | || | || || | | |||| || ||||| | || || |||||| | Sbjct 13364 TGCTTACTGGACTGCCTTCGTATGTTTTGTATGGACCAAAACGTTTTGCCTCTTCACATG 13305 Query 104957 ACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGATT 105016 ||| | || ||| ||| || ||||| || || || |||| | || | || Sbjct 13304 ACGCACTTAATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAATTG---CAATG 13248 Query 105017 CTTCTGAAC---CGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACAC 105073 | ||| | | |||| ||| | | ||||||||| | || || | ||| ||||| | Sbjct 13247 CAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTTGAACTC 13188 Query 105074 CAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGT 105133 | | ||| || |||||||| | || || ||| || | | || ||||| || | Sbjct 13187 CTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGTAGAAAT 13128 Query 105134 TTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACG--ATGTAACTC 105191 || ||||||||| || || || || || || || || | | | |||| Sbjct 13127 TTACATCAATAACACGATTCAAATTGATAGTGAC--TTGTCTTACAATGTCAAATAACAT 13070 Query 105192 TTC---ATGGTTAAACTCG-TTCTTCTCGACA------TCAACGTATTTTGGTAACGCGA 105241 || || || ||||| | || | |||| | || || ||||||||| || Sbjct 13069 TTGGAAATTGT-AAACTGGCTTGTCCTCGTCGCTCATGTCCACCATTTTTGGTAAGCAGA 13011 Query 105242 TTGATGCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTAC 105301 | ||||| | ||||| || || |||| || | ||| | || | || || || | Sbjct 13010 TAGATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTCAGTGC 12951 Query 105302 ACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGT 105361 | ||||| ||||||||| || | || || || || || || |||||| || | Sbjct 12950 ATAAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACATGCAT 12891 Query 105362 CTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAA 105421 ||||||| | ||| ||||| || || |||||| ||| || ||| ||| ||| | Sbjct 12890 CTTTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGATTTTAAACCATA 12831 Query 105422 TCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGAT 105481 || || |||| | | | | ||||| ||| |||| | ||| | Sbjct 12830 ATTCTTGTGCACGTACGGTTCTGTAACCCTTGCCTTCTTTTTCATATTGATGGTACAATG 12771 Query 105482 CTTCAAACTCTTTACCGTACACGTCTGAA--AGACCCTTTGCCTGATCAGGACAAAACAA 105539 |||| || | | ||| ||||||| | | | | ||| || || |||||||| Sbjct 12770 CTTCGAATTTCTCACCC--CACGTCTCATGCAAATCACGTGCAACATTTGGGCAAAACAA 12713 Query 105540 TGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGA 105599 || ||| | ||||| | || || ||||||||||| ||||||||||||||||| || | Sbjct 12712 TGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGAATCCACATTGCATA 12653 Query 105600 AAAGAGGTCTCGA-CACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAAT 105658 || | || || ||| | || | ||||||||| ||||| || || | ||| | Sbjct 12652 GAACAAATCGCGTGCACGT-GCATTTTCATCACCATGATTTTTTTTAAGATCTAAAAACT 12594 Query 105659 CGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCC 105715 ||| | ||| || ||||||||||| || || | |||| ||| ||||| | || | Sbjct 12593 CGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAACCTTTTCTTTTACCGC 12534 Query 105716 CCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCAT 105775 | |||| | || || | |||||| || | |||| | |||||| | ||| |||| Sbjct 12533 CACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGCATTGGGACAATTCCAT 12474 Query 105776 CGGATGTTCCATTTGTTCCACGAATATGTGATTT--ATTTGCACGTACATCGTGAACGTG 105833 || |||||||| || || || || | || | | ||| | | |||||| Sbjct 12473 TACTTGAGCCATTTGTACCGCGGAT--GTAACTTCCAGTACTACGGATGTTGTGAACACT 12416 Query 105834 TAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAAT 105893 || |||||||| ||||| | |||||||| ||||||| ||||| ||||| ||||| Sbjct 12415 CAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGATTTTAACGTATCATAAAT 12356 Query 105894 ACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGG 105953 ||| | || ||| || || | |||| || || || |||| || |||||| | || Sbjct 12355 ACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGATGCCAATTGTGGGCGTGG 12296 Query 105954 TGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTC 106013 |||||||||||||||| || || |||||||| | |||| ||| | | || Sbjct 12295 GGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATCATTTTACTCATCAAATC 12236 Query 106014 GTATGT--TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071 |||||| | || || || || ||||| | |||||||||| || || |||||| Sbjct 12235 GTATGTGATAATAGCAC-TG-TCGATATCTTCCTTGTGAATACCAACTGCAACACGCATA 12178 Query 106072 TAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCA 106131 | || ||| ||| |||||| ||||||||| | |||||| | ||| | ||| Sbjct 12177 ATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTTTCAACAAATATGCACGTTCT 12118 Query 106132 AGTGTTTTTAAACCAAAATACCCAAACTCAAAATCACG 106169 || ||||| |||||||| || ||||| || ||||| Sbjct 12117 AGCGTTTTGAAACCAAAGTAATCAAACGAGAAGTCACG 12080 >seq675 Length=42621 Score = 156 bits (172), Expect = 5e-33 Identities = 238/335 (71%), Gaps = 7/335 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||||||||| || ||||||||||| || || ||||| ||||| || ||||| Sbjct 29970 ATCAAAATCTTCACCACCTAAATGTGTATCCCCAGCAGTTGCTTTAACTTCGAAAATACC 29911 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||||| ||| | |||||||| || ||||||||||| | ||||| | | | Sbjct 29910 TTTTTCAATGGCTAAAATGGAAACATCGAATGTACCACCACCTAAATCAAATACTAAAAT 29851 Query 7576 G---TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | ||| | | | || | || | ||| | ||| || || | || || || ||||| Sbjct 29850 GTTTTTCTTTTTCGCTTCATCTTTATCATCCAAACCATAAGCCAATGCAGCAGCAGTTGG 29791 Query 7633 TTCATTAATAATACG-AAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 |||||| |||||||| | ||| ||| ||||||||||||| | |||||||| || ||| Sbjct 29790 TTCATTGATAATACGCATGAC--TTCAAGGCCAGCAATAGCACCTGCATCTTTAGTAGCT 29733 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 ||||| ||||| | || || || || || || | || || | | |||| | Sbjct 29732 GCACGTTGGGAATCACTGAAATATGCTGGTACAGTGATAACTGCTTTTTTAACTTCATGG 29673 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGT 7785 || | | | | ||| ||||| | ||||||||| || Sbjct 29672 CCTAAAAATGTTTCAGCGATTTGTTTCATTTTAGT 29638 >seq2286 Length=9169 Score = 147 bits (162), Expect = 3e-30 Identities = 396/599 (66%), Gaps = 10/599 (2%) Strand=Plus/Plus Query 22438 TGTAAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAA 22497 || ||||||||||| ||||| || ||||| | ||| ||||| | ||||| || ||| Sbjct 3364 TGCAAATTTTATCAAGCATCCACGAGTGAGCTATTCGGAAAAGTGCAAGAAACGCCCCAA 3423 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 || || | |||||||| ||||| | ||||| || | || |||||| | ||| Sbjct 3424 AAAGAGACCACACCGTTCTACCCAAGATCACCGTACGCTGTTGCTAAACAATATGCTTAT 3483 Query 22558 TGGGCGACAGTT---AATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATG 22614 || || |||| || ||| | || | || || ||| | ||||||| ||| || Sbjct 3484 TG---GATAGTTGTCAACTATCGGGAGGCTTATGGAATGCACTTAAGCAATGGCATACTG 3540 Query 22615 TTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGT 22674 || ||||||||| || |||| || ||||| || || ||||| ||| | | Sbjct 3541 TTTAACCACGAAAGTCCTCGACGTGGACTGGCTTTCGTCACTCGTAAAATTACAAGAGCT 3600 Query 22675 GTCGCTAATA-TCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAA 22733 || ||||| | | | ||| || || |||||| ||| || || || | ||||| || Sbjct 3601 GTGGCTAACATTAAATGC-GGCAACCAAAAAACTTTGACACTGGGAAATTTGGATGCAAA 3659 Query 22734 ACGAGATTGGGGTCATGCACGCGATTACGTGAAATG-TATGTGGAAAATATTACAACAAG 22792 || || ||||| |||||| || || || | ||| |||||| ||| | ||||||| Sbjct 3660 GCGGGACTGGGGACATGCAAAAGAATATGT-ATATGCCATGTGGTTAATGCTTCAACAAG 3718 Query 22793 ATAAACCGGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCGTGAGAGAATTTACCC 22852 | ||| | ||| | |||| |||||| || | ||| | || |||||| | ||| | Sbjct 3719 AATTACCAGGAGACTATGTTTGTGCAACTGGAGAAACGAATACTGTGAGATATTTTGTCG 3778 Query 22853 AAAAATCATTTAAATGTATAGGTATAAATTTATCTTTCAAGGGTGATGGAAAATATGAAA 22912 ||| ||||| | | || || || | ||| || || ||| | |||| Sbjct 3779 AAATGTCATTCGCAGTCGTTGGAATTGATATCGCTTGGTCTGGGGAGGGAGTTAACGAAA 3838 Query 22913 TTGGTGTAAATGAGGAAAATGGAGATGTTTTAGTTCGTGTGCACCCGGATTATTTCAGAC 22972 ||||||||||| | || || || |||||||| || ||| | |||| ||||| Sbjct 3839 TTGGTGTAAATAAATCAACTGAGGAAGTTTTAGTGAAAGTAAGCCCAAAGTATTACAGAC 3898 Query 22973 CTGCAGAAGTTGAATTATTATTAGGTGACCCTACAAAAGCTTTGAGAAAATTAGAATGG 23031 | | ||||| || || || | || ||||| ||||||||||| ||| ||| ||||| Sbjct 3899 CAACGGAAGTGGAGTTGTTGATTGGGGACCCGACAAAAGCTTTTGAAAAGTTAAAATGG 3957 >seq810 Length=26514 Score = 136 bits (150), Expect = 5e-27 Identities = 247/360 (69%), Gaps = 6/360 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||||||||| || |||||||| || || || ||||| |||||||| |||| Sbjct 19127 ATCAAAATCTTCACCACCTAAATGTGTATCACCTGCAGTTGCTTTCACTTCAAATATACT 19186 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG----- 7570 || | |||| || | |||||||| ||||||||||| | ||||||| | Sbjct 19187 ATTTTGTACACTTAATAATGTCACATCAAATGTACCACCACCTAAATCAAAAACGATAAT 19246 Query 7571 AGTACGTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | ||||| || | ||||| |||| | ||| || || ||||| || || || Sbjct 19247 ATTTCGTTCCCCACGCTTATCTTTCACAATATCTAAACCATATGCAATAGCAGCTGCGGT 19306 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 |||||||| || || | | | |||| || ||||| | | || |||| ||||| Sbjct 19307 CGGTTCATTGATGATTCTTAAAATTTTCAATCCGGCAATTGCACCTGCTGCTTTTGTCGC 19366 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 | ||||| ||||| || || || ||||| || || || || || | || ||||| Sbjct 19367 ATACCGTTGTGAATCATTGAAATATGCCGGTACGGTAACTACTGCTTTTGTAACTTTTCG 19426 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | ||| ||||| || || | ||||||||| | |||||||| ||||| ||||| Sbjct 19427 TTGTAAATATGATTCAGCTATTTGTTTCATTTTATATAATACCATCGAAGAAATTTCTTC 19486 >seq2241 Length=703 Score = 132 bits (146), Expect = 6e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 6694 TACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCT 6753 |||||| || |||||||||||||| | ||| || | || | |||||||||| ||| | Sbjct 9 TACATTTAATATACCATTTGCATCGATATCAAATGTCACTTCAATTTGTGGTACACCACG 68 Query 6754 CGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTT 6813 |||||| | ||| ||||| ||||||| |||| ||| | ||| | ||||| | ||| | Sbjct 69 CGGTGCTGGTGGTATACCAGTTAAATTAAATTGACCTAATAATTTATTATCAGCTGCCAT 128 Query 6814 CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGA 6873 | |||||| |||| || ||||| | | ||| | ||||||||| ||| || Sbjct 129 TTCACGTTCCCCTTGATGTACTTTTAATTCCACTTGATTTTGATTATCAGCTGCGGTACT 188 Query 6874 GAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTC 6911 || | |||| |||| |||| ||||||||||||||||| Sbjct 189 AAATACTTGTCCTTTTTTAGTTGGAATCGTCGTATTTC 226 >seq633 Length=57244 Score = 107 bits (118), Expect = 2e-18 Identities = 310/470 (66%), Gaps = 13/470 (3%) Strand=Plus/Plus Query 11221 TGTACTTTGAGTATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTACGA 11280 || |||| || ||| |||| ||||| | || ||| ||| ||| ||||| ||| Sbjct 46676 TGCACTTCGAATATGTCTTTTCGTCCTTTAATATCCGGTTTGTCTACTGTTATTTGTCGA 46735 Query 11281 TCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCT 11340 ||||| | || || | |||| ||| | ||| | ||||| || ||||| | || Sbjct 46736 TCAAAACGTCCAGGTCTCAATATCGCCTTGTCCAAAATATCAGCCCGATTTGTACCTGCT 46795 Query 11341 ATAACAACAAT---TTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTTA 11397 | |||||||| |||||| || |||||||||||||| | ||||| || Sbjct 46796 AAAACAACAACGCCTTCAGTGG-ATGAA--AAACCATCCATTTCAACAAGCAATTGATTT 46852 Query 11398 ATTGTTTGTTCACGCTCATCGTTTG---CCGCAAACCCATTCATACTTCTTTTCTTACCA 11454 | || | || ||||| ||||||| | | ||| ||| | | | | | || Sbjct 46853 AAGGTATTCTCTCGCTCGTCGTTTGAGCCGGTAAATCCACCTTTCCCACGTGCACGAGCA 46912 Query 11455 ATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCAAAT 11514 | |||||||| ||||| ||||| | ||| || ||| |||||||||||| | ||| Sbjct 46913 ACAGCATCAATCTCATCAATAAATACAATGCAAGGTGTATTTTCACGTGCTTGCTTAAAC 46972 Query 11515 ATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAA--CGATGACCCCG 11572 | |||||| |||| | || || || |||||||||||||||| || | || || | Sbjct 46973 AAATCACGAACTCGTGATGGTCCAACACCTACAAACATTTCAATAAAATCACTG-CCACT 47031 Query 11573 AACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTAC 11632 || |||||| ||||| ||| | ||| || || | || ||||| | ||| || | Sbjct 47032 AATACTGAA-GAAAGGTACGCTCGCTTCGCCAGCAGTTGCTTTTGCTAGCAATGTCTTCC 47090 Query 11633 CTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACCG 11682 | || || || || || |||||||| |||||||||| |||||| Sbjct 47091 CAGTTCCAGGGGGGCCAACTAGCAATGCACCTTTTGGTATTTTCGCACCG 47140 >seq1642 Length=12514 Score = 100 bits (110), Expect = 4e-16 Identities = 246/372 (66%), Gaps = 6/372 (2%) Strand=Plus/Plus Query 22443 ATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGA 22502 ||| ||||| |||||||| ||||| | || ||||| ||| ||||| || Sbjct 1783 ATTGTATCAAGCATCTACCAGTGAGCTGTTTGGGAAAGTTCGCGAAGTGCCACAGTCGGA 1842 Query 22503 AAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGC 22562 || || || ||||| || || |||||||||| || || ||| | | || ||| Sbjct 1843 AACAACCCCTTTTTATCCACGGTCACCATATGCAGTTGCAAAACAATTTGCATTCTGGAT 1902 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || ||||||||| | ||||| ||| | | ||||| || | || ||||| Sbjct 1903 GCTTGTAAACTATAGAGAAGCGTACGGCATGCATCTTTCTAATGGGATTTTATTTAACCA 1962 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || || | || | | ||||| || |||||||| || | || |||| Sbjct 1963 TGAAAGCCCACGAAGAGGGGCTACGTTCGTCACGCGAAAAATTACTAGAGCAGTTGCTAG 2022 Query 22683 TATCAGTGCAGGTAAA---CAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGA 22739 |||| | |||| ||| | || || || ||||| ||||| |||| ||||| Sbjct 2023 AATCAA---ATGTAATTTGCAAGATACATTGTATCTAGGTAATATAGATTCGAAGCGAGA 2079 Query 22740 TTGGGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACC 22799 |||||| ||||| ||||| ||| || ||||||| ||| |||| ||||||| || Sbjct 2080 TTGGGGGCATGCTAAAGATTATGTGGAAGCTATGTGGCTAATTCTACAGCAAGATATCCC 2139 Query 22800 GGAAGATTTTGT 22811 ||| |||| ||| Sbjct 2140 GGATGATTATGT 2151 >seq620 Length=67610 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/212 (73%), Gaps = 13/212 (6%) Strand=Plus/Minus Query 184181 TCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTACATTT-ACCCCT 184239 || |||||| | || |||||| || || |||||||| || | |||||| ||| | Sbjct 58421 TCATTGTTTAC---AATTTGTTTAGCAGGTGCATCACGCACATT-TAACATTTTACCTTT 58366 Query 184240 AAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAATTGCAAGTGT 184299 | ||||| |||||||| | |||||| || ||||||||||| ||||||| ||| | || Sbjct 58365 TAATGGAAATACACCGTATTTATCACGCCCGACAACTGAAAGTCCAGCAACTGCTAATGC 58306 Query 184300 TTTTGCAGAATCACCTTCGGT-AATAATAA-GAGTACACTTACCA--GAGTGTGTGGTAC 184355 ||||| ||||||||||| || |||| || ||| |||| ||| || | || | || Sbjct 58305 CTTTGCTGAATCACCTTCAGTCAATATCAACGAG--CACT--CCAATGATTTTGCAGAAC 58250 Query 184356 CGGCTTTATTGGCATCGTCGAGTTTTGGAATA 184387 | || | ||| ||||| || | ||| || ||| Sbjct 58249 CAGCATCATTCGCATCTTCTAATTTCGGTATA 58218 >seq2390 Length=8212 Score = 82.4 bits (90), Expect = 1e-10 Identities = 128/178 (72%), Gaps = 10/178 (6%) Strand=Plus/Plus Query 176080 TATGGTCGTATTGCGCCTAGATCAGGTTT---AAGTGTAAAACACGGTATTCAAACGGGT 176136 |||||| | |||||||| ||||||||||| | | ||||||| ||| | || Sbjct 587 TATGGTAGAATTGCGCCAAGATCAGGTTTGGCATGGAAAAAACAC---ATTGATGTCGGC 643 Query 176137 GCTGGTGTTATTGATCCGGACTATACGGGTGAAT--TGAAGGTTATCTTGTTTAATCACG 176194 ||||||||||||||| |||| ||| || | ||| || || || | || ||||| || | Sbjct 644 GCTGGTGTTATTGATGCGGATTAT-CGTGGAAATGTTGGAG-TTGTTTTATTTAACCATG 701 Query 176195 GGAGTGAACCGTTCGAAATTAAACAAGGCGATAGAATCGCCCAACTCATTTTGGAAAA 176252 || ||| || || |||||| ||| || ||||| || ||| | ||||||||||| Sbjct 702 GGGAAGAAGATTTACAAGTTAAACGAGGTGACAGAATTGCACAATTAATTTTGGAAAA 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635060188442640