Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq2390 84.2 6e-12 >seq2390 Length=8212 Score = 84.2 bits (92), Expect = 6e-12 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 969 TGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGTGGGT 1028 || ||||||||||| || || || || || || || || |||||||| || Sbjct 584 TGCTATGGTAGAATTGCGCCAAGATCAGGTTTGGCATGGAAAAAACACATTGATGTCGGC 643 Query 1029 GCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTTTAGC 1088 ||||||||||||||| | || | | | || || ||||| |||||||||||||| | | Sbjct 644 GCTGGTGTTATTGATGCGGATTATCGTGGAAATGTTGGAGTTGTTTTATTTAACCATGGG 703 Query 1089 GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGAAAA 1144 || | ||| || || | ||||||| || ||||| || ||||||| ||||| Sbjct 704 GAAGAAGATTTACAAGTTAAACGAGGTGACAGAATTGCACAATTAATTTTGGAAAA 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138666537964776