Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq810 109 4e-19 >seq810 Length=26514 Score = 109 bits (120), Expect = 4e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGT-GCTCTCTTTTTGAATATTGTAATCAGATAGACTTCG 48607 || || || || ||||||| || ||| |||||||| || ||||| ||| || | || Sbjct 7733 AGACGTAATACTAAATGTAAAGTTGCT-TCTTTTTGGATGTTGTAGTCACTAAGTGTACG 7675 Query 48608 ATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTC 48667 | || ||||| || ||||| ||||| || || || |||||||| | |||| || || Sbjct 7674 TCCATCTTCCAATTGTTTACCTGCAAAGATAAGACGTTGTTGATCTGGTGGAATTCCTTC 7615 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||||| ||||||||||||||| | | || || || | || || || | || Sbjct 7614 TTTGTCTTGAATCTTTTGTTTTACGTTTTCAATAGTATCAGATGGTTCTACATCAAGGGT 7555 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||||||||||||| ||||| ||||| Sbjct 7554 GATGGTTTTACCAGTCAAAGTTTTTACGAAAATTTGCAT 7516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380895138076158