Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq888 414 1e-110 >seq888 Length=1579 Score = 414 bits (458), Expect = 1e-110 Identities = 505/689 (73%), Gaps = 0/689 (0%) Strand=Plus/Plus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | |||||| ||||| ||||||| ||||||||| || ||||| Sbjct 887 AGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGTGGCTGATCT 946 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||||| ||||||||| | |||||| || | || || |||||||||||||| || Sbjct 947 TGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTTGTGTAGAATGTT 1006 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || ||||| |||||||| || || | ||||||||| ||||| || || || ||||| ||| Sbjct 1007 TCAAACTCAGGATCTTCAGCAGCACGGATCTCTTGCGATACGAAATCGTATGCACGGAGG 1066 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || || | |||| || ||| | | |||| | || | ||||| || || Sbjct 1067 TTACATGCTAATCCAACAACACCAAGTGCTGACATCCATAATCCTGTTACAGGTACGAAA 1126 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 ||||| ||||| || | ||| | ||| || ||||| | ||| || || || |||||| Sbjct 1127 AGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAATGCTACACCGAAAATCTGTGACCAG 1186 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 |||||||| ||||| |||||||| ||||||||||| ||||||| | | || || | Sbjct 1187 AAACGGTTAGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGTGTTGGGTTAAACGCACGG 1246 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || ||||||| |||||||||||| | || ||||| || || || ||||||| ||| Sbjct 1247 AATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTTTCTACTGTTGCACCGTGAATT 1306 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | || |||||| |||| || | || || ||||||||||| |||||| |||| || Sbjct 1307 GCACAAAGAAGTGCTGCTCCAAGTACTCCAGCTACACCCATCATGTGGAATTGGTTAAGT 1366 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 |||||||| ||||| || || | ||| || | || | || || | || ||||| || Sbjct 1367 GTCCAGTTGTGGAACCCTTGGAAGAAAAGGATAAAACGGAAAATTCCAGCTACACCGAAT 1426 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 || || ||||||||||| | |||||||| || || || || || || ||| || || Sbjct 1427 GAAGGTGCAAAGAACCATCCTGACTGTCCAAGTGGGTAAATAAGGAATACAGATACGAAT 1486 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 ||||| ||||| | ||||||||||| || ||||||||||||||| | | | || Sbjct 1487 ACAGCAATAGGAGCTGAGAACGCAATTGCGTTGTACGGACGAATTTGTACTGCACGTGCA 1546 Query 102370 AACTCGAATTGACGAAGCATGAAACCAAT 102398 | || |||||||||||||| || || || Sbjct 1547 ATTTCAAATTGACGAAGCATAAATCCGAT 1575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633441173557680