Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq888 421 7e-113 >seq888 Length=1579 Score = 421 bits (466), Expect = 7e-113 Identities = 509/693 (73%), Gaps = 0/693 (0%) Strand=Plus/Minus Query 167338 ATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCCTGATTGGTATCCGTCCCTACAAT 167397 || || || |||||||| || |||||| |||| || | || ||||| ||||| Sbjct 1575 ATCGGATTTATGCTTCGTCAATTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAAC 1516 Query 167398 GCTATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTC 167457 || ||||| ||||| | |||||||||||| ||||| || |||||| | || || || Sbjct 1515 GCAATTGCGTTCTCAGCTCCTATTGCTGTATTCGTATCTGTATTCCTTATTTACCCACTT 1456 Query 167458 GGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTC 167517 || || | ||||||||||| || || ||||| || || | || ||||| || || Sbjct 1455 GGACAGTCAGGATGGTTCTTTGCACCTTCATTCGGTGTAGCTGGAATTTTCCGTTTTATC 1396 Query 167518 CTCTTCCTCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCA 167577 || ||| ||||||| ||||||||||||||||| || | ||| || |||||||||||||| Sbjct 1395 CTTTTCTTCCAAGGGTTCCACAACTGGACACTTAACCAATTCCACATGATGGGTGTAGCT 1336 Query 167578 GGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTG 167637 || | || || | ||| | |||| |||||| || |||| |||||||| || || | Sbjct 1335 GGAGTACTTGGAGCAGCACTTCTTTGTGCAATTCACGGTGCAACAGTAGAAAACACACTT 1276 Query 167638 TATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAG 167697 | ||||||||||| ||||||| || || || | | || || | |||||| Sbjct 1275 TTCGAAGATGGTGATGGTTCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAG 1216 Query 167698 ACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGC 167757 ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| | || ||| Sbjct 1215 ACTTACTCAATGGTAACAGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCATTCTCA 1156 Query 167758 AACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCA 167817 ||||| || |||||||| ||||| ||| | ||||| || || | ||| | |||| ||| Sbjct 1155 AACAAGCGTTGGCTTCACTTCTTCATGCTTTTCGTACCTGTAACAGGATTATGGATGTCA 1096 Query 167818 TCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAG 167877 | |||| | |||| | || ||| || ||||| ||||||||||| || |||||| Sbjct 1095 GCACTTGGTGTTGTTGGATTAGCATGTAACCTCCGTGCATACGATTTCGTATCGCAAGAG 1036 Query 167878 ATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAAT 167937 ||| | || || || ||||| ||||||||||| ||||| || || || || ||||| || Sbjct 1035 ATCCGTGCTGCTGAAGATCCTGAGTTTGAAACATTCTACACAAAGAATATTCTTCTTAAC 976 Query 167938 GAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCA 167997 |||||| |||| |||||| | ||| || ||||| || ||||| ||| |||| ||||| Sbjct 975 GAAGGTATTCGTGCATGGATGGCAGCTCAAGATCAGCCACATGAAAACCTTGTATTCCCT 916 Query 167998 GAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 ||||| || || ||||| || ||||| || ||| Sbjct 915 GAGGAGGTACTTCCACGTGGAAACGCTCTTTAA 883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561183835322400