Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq888 390 1e-103 >seq888 Length=1579 Score = 390 bits (432), Expect = 1e-103 Identities = 504/696 (72%), Gaps = 0/696 (0%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || || || || || |||||||||| ||||||||| || | Sbjct 882 ATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGTGGCT 941 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||||||||||| |||||| || | ||||| ||||||||||||| Sbjct 942 GATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTTGTGTAGA 1001 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || || ||||| || ||||| || || | ||||||||| ||||| || || || |||| Sbjct 1002 ATGTTTCAAACTCAGGATCTTCAGCAGCACGGATCTCTTGCGATACGAAATCGTATGCAC 1061 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| || | |||| || ||| | | |||| | || | ||||| | Sbjct 1062 GGAGGTTACATGCTAATCCAACAACACCAAGTGCTGACATCCATAATCCTGTTACAGGTA 1121 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 | || | ||| ||||| || | ||| | ||| || || || | ||| || ||||| | Sbjct 1122 CGAAAAGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAATGCTACACCGAAAATCTGTG 1181 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 ||||||| ||||| || || |||||||||||||| ||||| |||| || | || || | Sbjct 1182 ACCAGAAACGGTTAGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGTGTTGGGTTAAACG 1241 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| ||||||| ||||||||||| | || || || |||||||| |||| | Sbjct 1242 CACGGAATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTTTCTACTGTTGCACCGT 1301 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| ||| |||| | ||| | || || | || |||||||||||||| || || ||| Sbjct 1302 GAATTGCACAAAGAAGTGCTGCTCCAAGTACTCCAGCTACACCCATCATGTGGAATTGGT 1361 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 | | |||||||| ||||| ||||| | ||| || | || || || ||| | | || | Sbjct 1362 TAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGGATAAAACGGAAAATTCCAGCTACAC 1421 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 |||| || || || || ||||| | || || || || ||||| || || || ||| | Sbjct 1422 CGAATGAAGGTGCAAAGAACCATCCTGACTGTCCAAGTGGGTAAATAAGGAATACAGATA 1481 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGAC 67245 | || ||||| |||||| | ||||||||||| || ||||| ||||| || | || Sbjct 1482 CGAATACAGCAATAGGAGCTGAGAACGCAATTGCGTTGTACGGACGAATTTGTACTGCAC 1541 Query 67246 GTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTA 67281 |||| | |||||| || |||||||| || || |||| Sbjct 1542 GTGCAATTTCAAATTGACGAAGCATAAATCCGATTA 1577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571988999880720