Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq810 107 2e-18 seq6389 96.9 3e-15 >seq810 Length=26514 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || |||||||| || || |||||||| ||| | || || || Sbjct 7516 ATGCAAATTTTCGTAAAAACTTTGACTGGTAAAACCATCACCCTTGATGTAGAACCATCT 7575 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||||| |||||| ||||||||||| | || |||||| Sbjct 7576 GATACTATTGAAAACGTAAAACAAAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAA 7635 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||| | ||| |||||||| |||| |||| | ||| | || |||||| Sbjct 7636 CAACGTCTTATCTTTGCAGGTAAACAATTGGAAGATGGACGTACACTTAGTGACTACAAC 7695 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||| | || || || | || ||| | || || || || Sbjct 7696 ATCCAAAAAGAAGCAACTTTACATTTAGTATTACGTCTTCGTGGAGG 7742 >seq6389 Length=961 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 110284 TGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATAC--TGTC 110341 ||| ||||||||||| || ||||| ||||| | || || ||| | |||||| | || Sbjct 228 TGTAAAAACTTTAACTGGAAAAACAATTACTCTAGATACAGAGGCAAGCGATACCATTTC 169 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | || ||||| ||||| || |||||||| | || || |||||| || | Sbjct 168 G--CGTGTGAAACAAAAGATCCAAGATAAAGAAGGGATTCCACCAGACCAACAACGATTG 111 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | || |||||||| | || |||| | ||| | || ||||| || ||||||||| Sbjct 110 ATATTCGCAGGTAAACAATTAGAAGATGGACGTACATTAGCTGATTATAATATTCAAAAA 51 Query 110462 GAATCTACGTTGCA 110475 |||||||||||||| Sbjct 50 GAATCTACGTTGCA 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412795581836978