Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq888 437 9e-118 >seq888 Length=1579 Score = 437 bits (484), Expect = 9e-118 Identities = 519/701 (74%), Gaps = 2/701 (0%) Strand=Plus/Minus Query 159097 TAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCCTACA 159156 |||| || || |||||||| || |||||| | |||||| | || ||||| |||| Sbjct 1577 TAATCGGATTTATGCTTCGTCAATTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACA 1518 Query 159157 ATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCAC 159216 | || ||||||||||| | |||||||||||| || || || |||||||| ||||||| Sbjct 1517 ACGCAATTGCGTTCTCAGCTCCTATTGCTGTATTCGTATCTGTATTCCTTATTTACCCAC 1458 Query 159217 TTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCC 159276 |||| ||||| | ||||| || || || || || || || || | ||| ||| | || Sbjct 1457 TTGGACAGTCAGGATGGTTCTTTGCACCTTCATTCGGTGTAGCTGGAATTTTCCGTTTTA 1398 Query 159277 TACTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCATATGATGGGAGTTG 159336 | || ||| | |||||||||||||| |||||||| |||| ||||| |||||||| || | Sbjct 1397 TCCTTTTCTTCCAAGGGTTCCACAACTGGACACTTAACCAATTCCACATGATGGGTGTAG 1338 Query 159337 CTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACAGTTGAAAATACAT 159396 |||| | || || | ||||||||| | ||| ||||| || | ||||| ||||| ||| Sbjct 1337 CTGGAGTACTTGGAGCAGCACTTCTTTGTGCAATTCACGGTGCAACAGTAGAAAACACAC 1278 Query 159397 TATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGG 159456 | | ||| ||||| || ||||||| || |||||| | |||| |||| || | Sbjct 1277 TTTTCGAAGATGGTGATGGTTCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAG 1218 Query 159457 AGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTT 159516 ||||||| || ||||| || || ||||| |||||||| ||||| ||||| | || || | Sbjct 1217 AGACTTACTCAATGGTAACAGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCATTCT 1158 Query 159517 CTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACAT 159576 | |||||||| |||||||| ||||| ||| | || || ||||| | || |||||| | Sbjct 1157 CAAACAAGCGTTGGCTTCACTTCTTCATGCTTTTCGTACCTGTAACAGGATTATGGATGT 1098 Query 159577 CCAGTA-TTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAA 159635 | || | |||| || |||| | || || || ||||| ||||||||||| ||| Sbjct 1097 C-AGCACTTGGTGTTGTTGGATTAGCATGTAACCTCCGTGCATACGATTTCGTATCGCAA 1039 Query 159636 GAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTG 159695 |||||| | || || |||||||| || |||||||| |||||||| ||||| |||||||| Sbjct 1038 GAGATCCGTGCTGCTGAAGATCCTGAGTTTGAAACATTCTACACAAAGAATATTCTTCTT 979 Query 159696 AATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAACTTCATCTTC 159755 || ||||| | ||||| ||| ||||| || ||||| || ||||||||| | | ||| Sbjct 978 AACGAAGGTATTCGTGCATGGATGGCAGCTCAAGATCAGCCACATGAAAACCTTGTATTC 919 Query 159756 CCAGAAGAAGTTCTACCAAGAGGTAACGCATTGTGATTCAA 159796 || || || || || ||| | || ||||| | | |||||| Sbjct 918 CCTGAGGAGGTACTTCCACGTGGAAACGCTCTTTAATTCAA 878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545211261595680