Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq2390 95.1 3e-15 >seq2390 Length=8212 Score = 95.1 bits (104), Expect = 3e-15 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 1373 TTGTTACGGCAGAATAGCTCCAAGATCCGGTCTAGCG-GCAAAGTATTCAATTGATGTGG 1431 ||| || || ||||| || |||||||| ||| | || | ||| | || ||||||| | Sbjct 583 TTGCTATGGTAGAATTGCGCCAAGATCAGGTTTGGCATGGAAAAAACACA-TTGATGTCG 641 Query 1432 GCGCTGGAGTTATTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCATT 1491 ||||||| |||||||| | ||||||||||||| | | | |||||||||||||| ||| Sbjct 642 GCGCTGGTGTTATTGATGCGGATTATCGTGGAAATGTTGGAGTTGTTTTATTTAACCATG 701 Query 1492 CGGATGTGCCTTTCCATGTGTCGAGGGGAGACAGAATAGCTCAGTTAATTT 1542 ||| | ||| || || | || |||||||| || || ||||||| Sbjct 702 GGGAAGAAGATTTACAAGTTAAACGAGGTGACAGAATTGCACAATTAATTT 752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139812013542592