Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq810 125 6e-24 seq775 98.7 8e-16 seq2305 93.3 3e-14 seq6389 87.8 1e-12 seq4707 82.4 6e-11 >seq810 Length=26514 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| |||||||| || ||||| ||| | || |||||| Sbjct 7516 ATGCAAATTTTCGTAAAAACTTTGACTGGTAAAACCATCACCCTTGATGTAGAACCATCT 7575 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || |||||||| ||| ||||||||||| | || |||||| Sbjct 7576 GATACTATTGAAAACGTAAAACAAAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAA 7635 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||| | ||| || |||||||| |||||| || | | || |||||| Sbjct 7636 CAACGTCTTATCTTTGCAGGTAAACAATTGGAAGATGGACGTACACTTAGTGACTACAAC 7695 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||||||| | || ||||||||||||| Sbjct 7696 ATCCAAAAAGAAGCAACTTTACATTTAGTATT 7727 >seq775 Length=28483 Score = 98.7 bits (108), Expect = 8e-16 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313 |||| ||||||||||| || |||||||||||||| || ||||| || | || |||| Sbjct 10458 TTAATCATGCAAATTTTCGTAAAAACATTGACTGGTAAAACCATCACTCTTGATGTAGAA 10517 Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373 || ||| || ||| | || |||||||| || ||||||||||| | || Sbjct 10518 CCATCTGATACTATTGAAAACGTTAAACAAAAGATCCAAGACAAAGAAGGAATTCCACCA 10577 Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT 106415 ||||||||| | ||||| | ||| || |||||||| |||||| Sbjct 10578 GATCAACAACGTCTTATCTTTGCAGGTAAACAATTGGAAGAT 10619 >seq2305 Length=8964 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106278 ACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTG 106337 ||||||||||| || ||||| || | || |||||| ||| || ||| | || Sbjct 1336 ACATTGACTGGGAAAACCATCACGCTTGATGTAGAACCGTCTGATACTATTGAAAACGTT 1395 Query 106338 AAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCG 106397 ||||||||||| || |||||||| | || ||||||||| | | || | ||| Sbjct 1396 AAACAAAAAATACAAGATAAAGAAGGTATCCCACCAGATCAACAACGTTTGATATTTGCA 1455 Query 106398 GGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACA 106457 ||||||||||| |||||| || | | || ||||| || ||||||||| | ||| Sbjct 1456 GGCAAACAATTGGAAGATGGGCGTACACTTAGTGACTACAATATTCAAAAAGAAGCAACA 1515 Query 106458 CTACATTTAGTATTGAGGTTACGAGGAGG 106486 | |||||||| || || ||||| || || Sbjct 1516 TTGCATTTAGTTTTAAGATTACGTGGTGG 1544 >seq6389 Length=961 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 106271 TGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGG 106330 ||| ||||| || ||||| || || ||||| | || ||||| | ||||| | || Sbjct 228 TGTAAAAACTTTAACTGGAAAAACAATTACTCTAGATACAGAGGCAAGCGATACCATTTC 169 Query 106331 CCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTAT 106390 | ||||||||||| || || |||||||| | || || |||||| | | || Sbjct 168 GCGTGTGAAACAAAAGATCCAAGATAAAGAAGGGATTCCACCAGACCAACAACGATTGAT 109 Query 106391 TTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGA 106450 | || || ||||||||||||||| || | | ||||| || || |||||||| Sbjct 108 ATTCGCAGGTAAACAATTAGAAGATGGACGTACATTAGCTGATTATAATATTCAAAAAGA 49 Query 106451 ATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||| | |||||||| ||| | ||||| || || Sbjct 48 ATCTACGTTGCATTTAGTTTTGCGTTTACGTGGTGG 13 >seq4707 Length=625 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 106332 CAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATT 106391 || || || ||||| || ||||||||||| | || ||||||||| | ||||| Sbjct 248 CAGGTCAAGCAAAAGATCCAAGACAAAGAAGGAATTCCTCCAGATCAACAACGTCTTATC 307 Query 106392 TATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAA 106451 | ||| || |||||||| |||||| ||| | ||||| || || ||||||||| Sbjct 308 TTTGCTGGTAAACAATTGGAAGATGGACGTACTCTTTCTGATTATAATATCCAAAAAGAA 367 Query 106452 TCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 | || || |||||||||||| | ||||| || || Sbjct 368 GCAACCCTTCATTTAGTATTGCGTTTACGTGGTGG 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402284753576768