Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq888 500 1e-136 >seq888 Length=1579 Score = 500 bits (554), Expect = 1e-136 Identities = 534/704 (76%), Gaps = 1/704 (0%) Strand=Plus/Minus Query 159703 ATAGGTTTTATGCTACGGCAATTTGAAATTGCTCGTCTAGTTGGTATCCGTCCTTACAAT 159762 || || |||||||| || |||||||||||||| ||| ||| || ||||| ||||| Sbjct 1575 ATCGGATTTATGCTTCGTCAATTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAAC 1516 Query 159763 GCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTG 159822 || ||||||||||| | |||||||||||| || || ||||||||||| || ||||| Sbjct 1515 GCAATTGCGTTCTCAGCTCCTATTGCTGTATTCGTATCTGTATTCCTTATTTACCCACTT 1456 Query 159823 GGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTG 159882 || ||||| |||||||||||||||| ||||| ||||| | ||| || | || | Sbjct 1455 GGACAGTCAGGATGGTTCTTTGCACCTTCATTCGGTGTAGCTGGAATTTTCCGTTTTATC 1396 Query 159883 TTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 159942 | ||| | || || |||||||||||||| || |||| ||||| |||||||| || ||| Sbjct 1395 CTTTTCTTCCAAGGGTTCCACAACTGGACACTTAACCAATTCCACATGATGGGTGTAGCT 1336 Query 159943 GGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACATTG 160002 || |||| || | |||||| | |||||||| || ||||| || ||||| |||||| | Sbjct 1335 GGAGTACTTGGAGCAGCACTTCTTTGTGCAATTCACGGTGCAACAGTAGAAAACACACTT 1276 Query 160003 TTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAG 160062 || |||||||| || |||||||||| |||||| | || || |||| |||||| Sbjct 1275 TTCGAAGATGGTGATGGTTCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAG 1216 Query 160063 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCT 160122 ||||| || ||||| || || ||||| |||||||| ||||| |||||||| ||||| || Sbjct 1215 ACTTACTCAATGGTAACAGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCATTCTCA 1156 Query 160123 AACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCC 160182 |||||||| |||||||| || |||||| | || || ||||| | || |||||| || Sbjct 1155 AACAAGCGTTGGCTTCACTTCTTCATGCTTTTCGTACCTGTAACAGGATTATGGATGTCA 1096 Query 160183 TCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAG 160242 | |||| || |||| | || | ||||| ||||| ||||||||||| || ||| Sbjct 1095 GCACTTGGTGTTGTTGGATTAGCATGTAACCTCCGTGCATACGATTTCGTATCGCAAGAG 1036 Query 160243 ATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAAT 160302 || | || || ||||||||||| ||||| || |||||||| ||||| || || | || Sbjct 1035 ATCCGTGCTGCTGAAGATCCTGAGTTTGAAACATTCTACACAAAGAATATTCTTCTTAAC 976 Query 160303 GAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCT 160362 ||||| ||||||| ||||||||| || ||||| |||||||||||| || | |||||| Sbjct 975 GAAGGTATTCGTGCATGGATGGCAGCTCAAGATCAGCCACATGAAAACCTTGTATTCCCT 916 Query 160363 GAGGAAGTACTACCTAGAGGTAACGCACTGTGATTAAATCACTC 160406 ||||| ||||| || | || ||||| || | ||| || ||||| Sbjct 915 GAGGAGGTACTTCCACGTGGAAACGCTCTTTAATTCAA-CACTC 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572958489031200