Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq888 354 1e-92 >seq888 Length=1579 Score = 354 bits (392), Expect = 1e-92 Identities = 492/689 (71%), Gaps = 0/689 (0%) Strand=Plus/Minus Query 182685 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGAATCAGACCTTACAAT 182744 || || || |||||| | ||||||||| |||| || | ||| | || ||||| Sbjct 1575 ATCGGATTTATGCTTCGTCAATTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAAC 1516 Query 182745 GCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTG 182804 || ||||| || || | |||||||||||||||||| ||| ||||| || || || | Sbjct 1515 GCAATTGCGTTCTCAGCTCCTATTGCTGTATTCGTATCTGTATTCCTTATTTACCCACTT 1456 Query 182805 GGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTG 182864 |||||||| ||||| || || || || || ||||| || | || ||| | || | Sbjct 1455 GGACAGTCAGGATGGTTCTTTGCACCTTCATTCGGTGTAGCTGGAATTTTCCGTTTTATC 1396 Query 182865 TTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCT 182924 | ||| | || || ||||||||||||||||| |||| ||||| |||||||| || ||| Sbjct 1395 CTTTTCTTCCAAGGGTTCCACAACTGGACACTTAACCAATTCCACATGATGGGTGTAGCT 1336 Query 182925 GGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTG 182984 || |||| || | |||||| || |||| || || |||| |||||||| || || | Sbjct 1335 GGAGTACTTGGAGCAGCACTTCTTTGTGCAATTCACGGTGCAACAGTAGAAAACACACTT 1276 Query 182985 TATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAGGAG 183044 | |||||||| || |||||||||| ||||| | | || || | || ||| Sbjct 1275 TTCGAAGATGGTGATGGTTCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAG 1216 Query 183045 ACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGC 183104 || || || ||||| ||||| || ||||| |||||||| || ||||| || || || Sbjct 1215 ACTTACTCAATGGTAACAGCTAACCGTTTCTGGTCACAGATTTTCGGTGTAGCATTCTCA 1156 Query 183105 AATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCT 183164 || ||||||||| | |||||||| ||| | || || ||||| | || | ||| | || Sbjct 1155 AACAAGCGTTGGCTTCACTTCTTCATGCTTTTCGTACCTGTAACAGGATTATGGATGTCA 1096 Query 183165 TCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAG 183224 | |||| | |||| | || ||| || ||||| || ||||| || |||||| Sbjct 1095 GCACTTGGTGTTGTTGGATTAGCATGTAACCTCCGTGCATACGATTTCGTATCGCAAGAG 1036 Query 183225 ATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAAT 183284 || | || || |||||||||||||| || || |||||||||||||| || ||||| || Sbjct 1035 ATCCGTGCTGCTGAAGATCCTGAGTTTGAAACATTCTACACAAAGAATATTCTTCTTAAC 976 Query 183285 GAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCT 183344 ||||| | ||||| ||| ||||| || ||||| |||||||||||| | | |||||| Sbjct 975 GAAGGTATTCGTGCATGGATGGCAGCTCAAGATCAGCCACATGAAAACCTTGTATTCCCT 916 Query 183345 GAAGAAGTTCTACCTAGAGGTAACGCACT 183373 || || || || || | || ||||| || Sbjct 915 GAGGAGGTACTTCCACGTGGAAACGCTCT 887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614547333842880