Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq769 345 6e-90 seq8698 224 1e-53 >seq769 Length=28997 Score = 345 bits (382), Expect = 6e-90 Identities = 1195/1834 (65%), Gaps = 70/1834 (4%) Strand=Plus/Minus Query 68398 GGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGC 68457 ||| ||||||||| ||| |||||||||||||| | |||| ||||| | || || ||| Sbjct 13905 GGTCTTGTACGTAAATAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGC 13846 Query 68458 ATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGA 68517 || |||| ||| | ||||| | || || || | ||| | |||||||||| Sbjct 13845 ATGGAGGTTAATTTACCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTGA 13786 Query 68518 TCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAA 68577 || || | || || | || || ||||| |||| |||| | |||||| ||||||||| Sbjct 13785 TCAATATATGCACCACGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCAT 13726 Query 68578 ATAGTCTT--AAAAATCTGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATC 68632 | || || | |||||| | | || || | ||| | | | | |||||||| ||||| Sbjct 13725 ACCGTTTTGTATAAATCTTTGT-AT-TCTTTTGGCAAGTTTGATACATTTTGAACGGATC 13668 Query 68633 CACCATCGGATATAATTATATTC--TTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 ||||||| | |||||| || | |||| | |||| | ||| | |||| Sbjct 13667 CACCATCAGCGATAATTTGGTTACGTACATCTGGTG--TCCAAATATTTAATTTGATTAA 13610 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | || | | | ||| ||||| | |||||| || | | || | ||| |||| Sbjct 13609 ATCTTTCAATAAATGTTTGTTAACACATGTAAATTCACCGGCAAGTACACGGCGATTGTA 13550 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 ||||| || |||||||| | | |||| || || |||| |||||| | || ||||| Sbjct 13549 CATATTGGAAGTGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGC 13490 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 ||||||||| ||||| || | ||| ||||| | ||||||| | |||| ||| | Sbjct 13489 AGTTGGCATTGGTGCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATATTAGCGCG 13430 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 || | |||||||||| |||| ||||| || ||||| | ||| ||||| ||| Sbjct 13429 TAATCCTGCCCAATCCCAACGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAAAT 13370 Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990 ||| || ||| | || | ||||||| || || || ||| || ||| Sbjct 13369 TCCTTTGCTTACTGGACTGCCTTCGTATGTTTTGTATGGACCAAAACGTTTTGCCTCTTC 13310 Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 ||| || |||||| | | ||||| ||||| || || | || || | | Sbjct 13309 ACATGACGCACTTAATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAATTGCAA 13250 Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 ||| || | || || ||||| | | | |||||||||||||| || || ||||| Sbjct 13249 TGCAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTTGAAC 13190 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 || | ||| || ||||| |||||| || ||| |||||||||| | || || | Sbjct 13189 TCCTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGTAGAA 13130 Query 69171 ATTAATATCTATAATTTTATTAAGATT--TCG-GACTACTACTTTAACCACGTCCTTTAG 69227 ||| | ||| |||| ||| | ||| | | |||| | ||| || | ||| || Sbjct 13129 ATTTACATCAATAACACGATTCAAATTGATAGTGACTTGT-CTT--ACAATGTCAAATAA 13073 Query 69228 --TTTGAGAAAATCAAA------------TCGTCCATCTATAACAAACATATTCAGT--G 69271 |||| |||| | || ||||| || || | | ||| || || | Sbjct 13072 CATTTG-GAAATTGTAAACTGGCTTGTCCTCGTCGCTC-ATGTCCACCATTTTTGGTAAG 13015 Query 69272 CT-ACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCT 69330 | | |||||||| |||||||| || | |||| || | ||||| || ||||| Sbjct 13014 CAGATAGATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTCA 12955 Query 69331 GTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAG 69390 || |||| |||||||| ||| || || |||| ||||| ||||| || ||||| Sbjct 12954 GTGCATAAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACAT 12895 Query 69391 GCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTC 69450 || || ||||| | || | || ||||| ||||||| ||| ||| || || ||| Sbjct 12894 GCATCTTTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGAT---TTT- 12839 Query 69451 CAAACGACCCTAGCATTTAT-----TACGGTCTTGTAACGCTTC---TCTTTTTCATATT 69502 || ||| || || | |||||| |||||| ||| ||||||||||||| Sbjct 12838 --AA--ACCATAATTCTTGTGCACGTACGGTTCTGTAACCCTTGCCTTCTTTTTCATATT 12783 Query 69503 GT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATT 69560 | ||| | || |||||||| || ||||| |||| ||| || | |||| Sbjct 12782 GATGGTACAATGC--TTCGAATTTCTCACCCCACGTCTCATGCAAATCACGTGCAACATT 12725 Query 69561 TGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAAT 69620 ||| || | ||||| ||| |||| | | || |||||||| |||| ||| ||||| Sbjct 12724 TGGGCAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGAAT 12665 Query 69621 CCAAAGAGCTATA-AAGAGATCTC-TG---GTTCTATTTTCTTCATTTCCTGTAtttttt 69675 ||| | || ||| || | ||| | || || | |||||| ||| | || ||||||| Sbjct 12664 CCACATTGC-ATAGAACAAATCGCGTGCACGTGC-ATTTTCATCAC--CATG-ATTTTTT 12610 Query 69676 ttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACT 69735 |||||||| | |||||| | | ||||| |||||||||||| | || || || | Sbjct 12609 TTAAGATCTAAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAA 12550 Query 69736 CCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGC 69795 || || |||| || || || |||| ||| | || || | ||| | ||||||||| Sbjct 12549 CCTTTTCTTTTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGC 12490 Query 69796 ATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGA 69855 || || | ||| |||||| | |||||||| || || |||||||| | || Sbjct 12489 ATTGGGACAATTCCATTACTTGAGCCATTTGTACCGCGGATGTAACTTCCAGTACTACGG 12430 Query 69856 ATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTC 69915 || || || | | || || || || || |||| |||| | |||||| ||| Sbjct 12429 ATGTTGTGAACACTCAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGATTTT 12370 Query 69916 AATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC 69975 || || ||||| ||||| | ||| ||||||| |||| || | ||| || | | Sbjct 12369 AACGTATCATAAATACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGATGCC 12310 Query 69976 ATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAAC--CATT 70033 | ||| | || || || ||||| || ||||| || | ||| || || ||| |||| Sbjct 12309 AATTGTGGGCGTGGGGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATCATT 12250 Query 70034 TTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTA 70093 || | | || || |||||| |||||| || ||||| || ||||| || | Sbjct 12249 TTACTCAT--CAAATCGTATGTGATAATAGCACTGTCGATATCTTCCTTGTGAATACCAA 12192 Query 70094 TCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACA 70153 || |||||||| | |||||| || |||| ||| || ||| | |||||||||||||| Sbjct 12191 CTGCAACACGCATAATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTTTCAACA 12132 Query 70154 GGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 |||| ||| || ||||| || ||||| || Sbjct 12131 AATATGCACGTTCTAGCGTTTTGAAACCAAAGTA 12098 >seq8698 Length=1787 Score = 224 bits (248), Expect = 1e-53 Identities = 626/946 (66%), Gaps = 41/946 (4%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG--TGACATAACTCCCATTTT 39327 ||||||| ||| ||| |||||||| || | |||||||| | ||| | ||| || Sbjct 851 TTTAAAAATCACAATCCAAAGAAAATTGTTGATCTTCTTCACTTACACCAACACCAGCTT 910 Query 39328 TTGG-TATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 ||| ||||| || || ||||| || ||||| || ||||| |||| ||| || || ||| Sbjct 911 TTGAATATTCGCCTACACGTTTTTCAAAAAAGTTGGTTTTACCTTGCAAGGAGATCATTT 970 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| |||| || || || | |||||| || |||| | |||||| || | || Sbjct 971 CCATCCAATCGAATGGGTTGGATGCATTGTACATTTTAGATACACCTAATGCTTGTAACA 1030 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 | | ||| || ||||| |||||| ||||| | | ||||| || || | || Sbjct 1031 AACGATCAGCGCAGAATTCAATGTATTGGCACATCAATGTTGAGTTCATGCCAATCAATT 1090 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566 |||||||| | | | | ||| |||||||||| || || || ||| || Sbjct 1091 CAACTGGTAATGATTGGGAGACAAATACTTTTTCGATTTCAACCGC-------ATTGCCG 1143 Query 39567 ATGTT--ACTACCTCATCAC-TC-GGTG---GATGCAATAAATG---TTTAAACATTAAG 39616 ||| | | | || | | || ||| ||| | |||||| ||| | | |||| Sbjct 1144 ATGATTGAATGAATCGTTTCCTCTGGTAAACGATTTACTAAATGATCTTTGTATAATAAG 1203 Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || ||||| |||||||| | || ||||| | ||| |||||||| ||||| | Sbjct 1204 CATGCGAAATCACAATGCAAACCTTCATCACGTGAAATCAATTCGTTTGAAAAACATAAA 1263 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||| | |||||| ||||| | |||||| | |||| || || ||| |||||| Sbjct 1264 CCTGGCATCATACCACGTTTTTTTAACCAAAACACGGCACAGAAGGAACCACTGAAGAAG 1323 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC------TTGTATCATTA 39790 || ||||| || || |||||||| | | |||| || ||| |||| | | Sbjct 1324 ATACCTTCACACGCAGCGAATGCAACGACGCGCTCTGCG-AACGATGCGTTGTCTGCGTT 1382 Query 39791 TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGC 39849 || ||| | ||| || ||||| |||||| || | ||||| || ||||| Sbjct 1383 GGT--CCAACGCAAGCACCATTCTGCTTT-TTCTTTGACGGCATCGATTGTATCAATAGC 1439 Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 ||| || | | |||||| || || || || || |||||||||| ||| Sbjct 1440 ATTCAACAAACGCGTTTTTTCTGGACCATTACGAATGTAAGTGTCTATTAACAAGGAATA 1499 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969 || ||||| ||| || ||||| || || || ||||| || || ||||| | |||||||| Sbjct 1500 CACTTCTGCATGAATATTTTCGATAGCGATTTGAAAGCCATAGAAACAACGTGCTTCAGG 1559 Query 39970 AATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027 | ||| || || || | || || | | ||||||||| || || || || || Sbjct 1560 CACTTGCACTTCGTTGGAAAAGTTCAT--CAACAAATTTTCGTTTACAATACCGTCGGAT 1617 Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATA---TTTTTCATCGGGTGTCAATTTA 40084 || || |||||||||||||| | |||| || || || | |||| ||| |||| Sbjct 1618 GCAGCGAAAAATGCCAATACGTTGCTAATGAAGTAACGTTCGTTATCG---CTCATTTTA 1674 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 | ||| || || ||||| || | |||| ||||| || ||||| || || || || Sbjct 1675 TCCCAATCTTTCGCATCTTGTGCCAAGTCTAACTCTTCCGCAGTCCAGAAAGATGCTTCA 1734 Query 40145 GCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAA 40190 || ||||| ||||| | ||| |||||| || ||| ||||| |||| Sbjct 1735 GCTTTTTTATACATTTGCCAAATATCATTATGTTGAATTGGGAAAA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686830269151440