Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8698 87.8 2e-12 >seq8698 Length=1787 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 ||| ||||| || ||||| | ||| ||||| || |||| ||||||||| | ||| || || Sbjct 1224 ACCTTCATCACGTGAAATCAATTCGTTTGAAAAACATAAACCTGGCATCATACCACGTTT 1283 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC-CACACACGCAA 122794 || |||||| | | || ||||| || || |||||||||||| || ||| || || | Sbjct 1284 TTTTAACCAAAACACGGCACAGAAGGAACCACTGAAGAAGATACCTTCACACGCA-GCGA 1342 Query 122795 ACGCAAAAAGGCGTTCGGCGAAGGA 122819 | |||| | ||| || ||||| || Sbjct 1343 ATGCAACGACGCGCTCTGCGAACGA 1367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627960200241600