Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8698 82.4 9e-11 >seq8698 Length=1787 Score = 82.4 bits (90), Expect = 9e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGT-TGAGGGTATCTTCTTCTCTGGTTC 94853 || || || ||||| || | ||||| || || || ||| |||||||||||| |||||| Sbjct 1367 TCGTTCGCAGAGCGCGTCGTTGCATTCGC-TGCGTGTGAAGGTATCTTCTTCAGTGGTTC 1309 Query 94854 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 94913 |||||| || | | |||| | || || || ||| | ||||||||| | || || || || Sbjct 1308 CTTCTGTGCCGTGTTTTGGTTAAAAAAACGTGGTATGATGCCAGGTTTATGTTTTTCAAA 1249 Query 94914 CGAGCTTATCTCTCGTGACGAGGG 94937 ||| | || || ||||| || || Sbjct 1248 CGAATTGATTTCACGTGATGAAGG 1225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583194118709040