Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq8698 82.4 8e-11 >seq8698 Length=1787 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/198 (70%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 59919 GCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG---GAGCATCATTT 59975 || || ||| |||||||||||||| | ||| |||| | | | ||||| || Sbjct 1421 GCCGTCAAAGAAAAAGCAGAATGGTGCTTGCGTTGGACCAACGCAGACAACGCATCGTTC 1362 Query 59976 GCACAACGTCTCATAGCTTTTGCATGCGTG-GAAGGAATCTTCTTCTCTGGCTCGTTCTG 60034 ||| | || || | || || || |||||| ||||| ||||||||| ||| || ||||| Sbjct 1361 GCAGAGCGCGTCGTTGCATTCGC-TGCGTGTGAAGGTATCTTCTTCAGTGGTTCCTTCTG 1303 Query 60035 TGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCT 60094 ||| | || ||| | ||||| ||||| | ||||| || | |||| || ||||| | Sbjct 1302 TGCCGTGTTTTGGTTAAAAAAACGTGGTATGATGCCAGGTTTATGTTTTTCAAACGAATT 1243 Query 60095 GATTTCCCGGGACGAGGG 60112 |||||| || || || || Sbjct 1242 GATTTCACGTGATGAAGG 1225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548462089902240