Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4707 118 1e-21 seq734 93.3 5e-14 >seq4707 Length=625 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||| || |||||||||||||| || || ||||| || ||||||||||| Sbjct 260 AAGATCCAAGACAAAGAAGGAATTCCTCCAGATCAACAACGTCTTATCTTTGCTGGTAAA 319 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | || |||| ||||| || | || |||||| ||||||| ||| | || |||||| Sbjct 320 CAATTGGAAGATGGACGTACTCTTTCTGATTATAATATCCAAAAAGAAGCAACCCTTCAT 379 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||| | || ||||| Sbjct 380 TTAGTATTGCGTTTACGTGGTGG 402 >seq734 Length=33368 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 || ||||| || || | || || || || || |||||| ||| ||| |||| Sbjct 10321 ATATTTGTAAAAACCTTGACTGGTAAAACCATCACTCTTTTTGTTCCTTCAACAGATACA 10380 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 |||| |||| || ||||| || || || || || ||||| ||||| || || ||| Sbjct 10381 ATTGAAAATACAAAATTAAAAATACAAGATAAAGAAGGTATTCCACCAGATCAACAACGT 10440 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 | || ||||| ||||||||||| || |||| |||||| || | || |||||| | ||| Sbjct 10441 TTGATATTTGCAGGTAAGCAACTAGAAGATGGTCGTACATTATCCGATTATAATATACAA 10500 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || | ||| |||| || ||| | || || || Sbjct 10501 GAGGAAGCCGTATTGCATTTAGTATTACGTTTGCGTGGAGG 10541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570245199263520