Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq769 324 2e-83 seq8698 271 1e-67 >seq769 Length=28997 Score = 324 bits (358), Expect = 2e-83 Identities = 1182/1828 (65%), Gaps = 58/1828 (3%) Strand=Plus/Minus Query 76806 GGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGC 76865 ||| ||||||||| ||| |||||||| ||||||| ||| ||||| | || || ||| Sbjct 13905 GGTCTTGTACGTAAATAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTGC 13846 Query 76866 ATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGA 76925 ||| || | ||| | || || | || || || | ||| | ||||||||| Sbjct 13845 ATGGAGGTTAATTTACCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTGA 13786 Query 76926 TCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAA 76985 || || | || || | ||||| ||||| |||| ||| || |||||| ||||||||| Sbjct 13785 TCAATATATGCACCACGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCAT 13726 Query 76986 ATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGT---ATTTTGAATGGAACCA 77042 | |||||| | | | |||| || | ||| | ||||| |||||||| ||| ||| Sbjct 13725 ACCGTTTTGTATAAATCTTTGTATTCTTTTGGCAAGTTTGATACATTTTGAACGGATCCA 13666 Query 77043 CCATCTGATATAATTGTATTCTTTATATCATCATTCCACA-ATTTCCTCTCTGTTAAAAC 77101 ||||| | |||||| || || ||| |||| | |||| | | ||||| | Sbjct 13665 CCATCAGCGATAATTTGGTTACGTACATCTGGTGTCCAAATATTTAATTTGA-TTAAATC 13607 Query 77102 TCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAAT 77161 | | | | ||| ||||| | |||||| || | | ||| | ||| |||| || Sbjct 13606 TTTCAATAAATGTTTGTTAACACATGTAAATTCACCGGCAAGTACACGGCGATTGTACAT 13547 Query 77162 ATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGT 77221 ||| || |||||||| | | |||| ||||| |||| |||||| | ||||| ||||| Sbjct 13546 ATTGGAAGTGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGCAGT 13487 Query 77222 TGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAG 77281 |||||| ||||| || | ||| ||||| | ||||||| | |||| ||| | || Sbjct 13486 TGGCATTGGTGCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATATTAGCGCGTAA 13427 Query 77282 ATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 | |||||||||| |||| || || || | ||| | ||| ||||| |||||| Sbjct 13426 TCCTGCCCAATCCCAACGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAAATTCC 13367 Query 77342 GTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACA 77401 || || | || | ||||||| || || || || || |||||| Sbjct 13366 TTTGCTTACTGGACTGCCTTCGTATGTTTTGTATGGACCAAAACGTTTTGCCTCTTCACA 13307 Query 77402 --ACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 77459 || | ||| |||||| | | ||||| ||||| || || | || || | | | Sbjct 13306 TGACGCACTT--AATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAATTGCAAT 13249 Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519 || | || ||||| || | | | ||||| ||||||||||| || |||||| Sbjct 13248 GCAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTTGAACT 13189 Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579 || | |||||| ||||| |||||| |||||| || ||||||| | || || || Sbjct 13188 CCTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGTAGAAA 13129 Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGT-TT 77638 || | || |||| ||| | ||| || ||| | | || | ||| || || Sbjct 13128 TTTACATCAATAACACGATTCAAATTGATAGTGACTTGTCTTACAATGTCAAATAACATT 13069 Query 77639 AAGAAAATCAAATCTTCCATCT-----------ATAACAAACATGTTCA--AAGCT-ATA 77684 |||| | || || | | | || | | ||| || |||| ||| Sbjct 13068 TGGAAATTGTAAACTGGCTTGTCCTCGTCGCTCATGTCCACCATTTTTGGTAAGCAGATA 13009 Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 ||||||| |||||||| || | |||| || | ||||| || ||||| || ||| Sbjct 13008 GATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTCAGTGCAT 12949 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCC 77804 | |||||||| ||| || || |||| |||||||| ||| || ||| |||| || Sbjct 12948 AAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACATGCATCT 12889 Query 77805 TTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACG 77864 || || | || | || || || ||||||| || ||| || || ||| | || Sbjct 12888 TTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGAT---TTT--AAACC 12834 Query 77865 ACTCTAGCTTTTAT---CATA--GATTTGTATC----GCCTCTCTCTTTCATATTGA--G 77913 | || | || | | || | | |||| | |||| ||| ||||||||||| | Sbjct 12833 A---TAATTCTTGTGCACGTACGGTTCTGTAACCCTTGCCT-TCTTTTTCATATTGATGG 12778 Query 77914 TATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG-GCATTCATTTGGG 77972 || | || ||| |||| || ||||| |||| ||| || | ||| |||||||| Sbjct 12777 TACAATGC--TTCGAATTTCTCACCCCACGTCTCATGCAAATCACGTGCAA-CATTTGGG 12721 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 || | ||||| ||| | |||||| | | || |||||||| || | ||| || ||||| Sbjct 12720 CAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGAATCCAC 12661 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 | ||| || | ||| || | | | ||||| || ||| ||||||||||| Sbjct 12660 ATTGCATAGAACAAATCGCGTGCACGTGCATTTTCATCACCATGATTTTTTTTAAGATCT 12601 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | |||||| | | ||||| |||||||||||| | || || || | | || || | Sbjct 12600 AAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAACCTTTTCTT 12541 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||| || || || |||| || | ||||| | ||| | ||||||| |||||| | | Sbjct 12540 TTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGCATTGGGACA 12481 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || ||| || |||||||| || || ||||||||| | || || || | Sbjct 12480 ATTCCATTACTTGAGCCATTTGTACCGCGGATGTAACTTCCAGTACTACGGATGTTGTGA 12421 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | || || || || || ||| ||| | || ||| ||| || ||||| Sbjct 12420 ACACTCAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGATTTTAACGTATCA 12361 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 || ||||| | || ||||| |||| || | ||| || | || ||| | Sbjct 12360 TAAATACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGATGCCAATTGTGGG 12301 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC--CATTTT--TCAGA 78448 | || || ||||| || |||||||| | |||||| |||||| |||||| ||| Sbjct 12300 CGTGGGGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATCATTTTACTCATC 12241 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTA 78507 || || |||||| |||||| || || || | ||| ||||| || || || | Sbjct 12240 AA----ATCGTATGTGATAATAGCACTGTCGATATCTTCCTTG-TGAATACCAACTGCAA 12186 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | |||||| || ||||||||||| | | | ||||||||||||||| |||| Sbjct 12185 CACGCATAATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTTTCAACAAATATG 12126 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATA 78595 ||| | ||||| |||||||| || Sbjct 12125 CACGTTCTAGCGTTTTGAAACCAAAGTA 12098 >seq8698 Length=1787 Score = 271 bits (300), Expect = 1e-67 Identities = 634/944 (67%), Gaps = 28/944 (3%) Strand=Plus/Plus Query 47790 GTTCTTT-AAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG--ACATAACTCCC 47846 ||||||| |||| ||| ||| |||||||| || | |||||||| | ||| | || Sbjct 846 GTTCTTTTAAAAATCACAATCCAAAGAAAATTGTTGATCTTCTTCACTTACACCAACACC 905 Query 47847 ATTTTTTGA-TATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 | |||||| ||||| || |||||||| || ||||| || ||||| |||| ||| || || Sbjct 906 AGCTTTTGAATATTCGCCTACACGTTTTTCAAAAAAGTTGGTTTTACCTTGCAAGGAGAT 965 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 ||||||| |||| ||||| || |||||| || ||||| | |||||| || Sbjct 966 CATTTCCATCCAATCGAATGGGTTGGATGCATTGTACATTTTAGATACACCTAATGCTTG 1025 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 | || | ||| || |||||| || ||| ||||| | | ||||| || || Sbjct 1026 TAACAAACGATCAGCGCAGAATTCAATGTATTGGCACATCAATGTTGAGTTCATGCCAAT 1085 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 | || |||||||| | | | | ||| ||| |||||| || |||| | || Sbjct 1086 CAATTCAACTGGTAATGATTGGGAGACAAATACTTTTTCGATTTCAACCGCATTGCCGAT 1145 Query 48086 TATCGATGTTACCGTTTCCTCACTTGGTG---GATACAACAAATG---TTTAAACATTAA 48139 || || | ||||||||| |||| ||| | ||||| ||| | | ||| Sbjct 1146 GATTGAATGAATCGTTTCCTC---TGGTAAACGATTTACTAAATGATCTTTGTATAATAA 1202 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||||| ||||||||||| | ||||||||| | ||| |||||||| ||||| | Sbjct 1203 GCATGCGAAATCACAATGCAAACCTTCATCACGTGAAATCAATTCGTTTGAAAAACATAA 1262 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | ||||||||||| | |||||| | || ||| || ||| ||||| Sbjct 1263 ACCTGGCATCATACCACGTTTTTTTAACCAAAACACGGCACAGAAGGAACCACTGAAGAA 1322 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA- 48318 || ||||| || || ||||| | | |||| || ||| | | |||||| | Sbjct 1323 GATACCTTCACACGCAGCGAATGCAACGACGCGCTCTGCG-AAC--GATGCGTTGTCTGC 1379 Query 48319 -----TCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAG 48372 |||| || ||| || || || |||||| || | ||||| || |||| Sbjct 1380 GTTGGTCCAACGCAAGCACCATTCTGCTTT-TTCTTTGACGGCATCGATTGTATCAATAG 1438 Query 48373 CATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432 |||| || | | ||||||| | || || |||||| |||||||| | || Sbjct 1439 CATTCAACAAACGCGTTTTTTCTGGACCATTACGAATGTAAGTGTCTATTAACAAGGAAT 1498 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 ||| ||| | ||||||||||| || || || ||||| || || ||||| | ||||| | Sbjct 1499 ACACTTCTGCATGAATATTTTCGATAGCGATTTGAAAGCCATAGAAACAACGTGCTTCAG 1558 Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGC--CAAATTCTCATTTACTATTCCATCACT 48550 | || || || | |||| ||||| | |||||| || ||||| || || || Sbjct 1559 GCACTTGCACTTCGTTGGAAAA--GTTCATCAACAAATTTTCGTTTACAATACCGTCGGA 1616 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610 ||||| |||||||| ||||| | |||| || || |||||| ||| ||||| Sbjct 1617 TGCAGCGAAAAATGCCAATACGTTGCTAATGAAGTAACGTTCGTTATCGCTCATTTTATC 1676 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||| || || ||||| || | |||| ||||| || ||||| || ||||| || || Sbjct 1677 CCAATCTTTCGCATCTTGTGCCAAGTCTAACTCTTCCGCAGTCCAGAAAGATGCTTCAGC 1736 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAA 48714 |||||||||||| | ||| |||||| | | ||| |||||||||| Sbjct 1737 TTTTTTATACATTTGCCAAATATCATTATGTTGAATTGGGAAAA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694589381989440