Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq769 342 7e-89 seq8698 223 5e-53 >seq769 Length=28997 Score = 342 bits (378), Expect = 7e-89 Identities = 1190/1831 (65%), Gaps = 62/1831 (3%) Strand=Plus/Minus Query 75400 TGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATG 75459 |||| ||||||||| ||| |||||||| ||||||| ||| ||||| | || || || Sbjct 13906 TGGTCTTGTACGTAAATAATACATACCGGTTTTTAAACCTTTTTTCCATGCATAAAAGTG 13847 Query 75460 CATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTG 75519 |||| |||| ||| | || || | || || || | ||| | |||||||| Sbjct 13846 CATGGAGGTTAATTTACCAGTGCTTGGTGCTGCAATGTGTACATTTAAACTTTGACTTTG 13787 Query 75520 ATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCA 75579 ||| || | || || | ||||| ||||| |||| ||| || |||||| ||||||||| Sbjct 13786 ATCAATATATGCACCACGGTCAGCTGCCATATTTAAAATAGTTTTTTGACTAATTTCCCA 13727 Query 75580 AATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGT---ATTTTGAATGGATCC 75636 | |||||| | | | |||| || | ||| | |||| |||||||| |||||| Sbjct 13726 TACCGTTTTGTATAAATCTTTGTATTCTTTTGGCAAGTTTGATACATTTTGAACGGATCC 13667 Query 75637 GCCATCAGATATAATTGTATTC--TTGATCTCATCATTCCACAATTTTCTCTCGGTTAAA 75694 ||||||| |||||| || | |||| | |||| | ||| | | ||||| Sbjct 13666 ACCATCAGCGATAATTTGGTTACGTACATCTGGTG--TCCAAATATTTAATTTGATTAAA 13609 Query 75695 ACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAA 75754 || | | | ||| |||||| | |||||| || | | ||| | ||| |||| Sbjct 13608 TCTTTCAATAAATGTTTGTTAACACATGTAAATTCACCGGCAAGTACACGGCGATTGTAC 13549 Query 75755 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCA 75814 ||||| || |||||||| | | |||| ||||| |||| |||||| | || || ||| Sbjct 13548 ATATTGGAAGTGTATGGTTCAAAACATTCGTTGTTGCCCATAATTTGCGAGGTAGATGCA 13489 Query 75815 GTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 75874 || ||||| ||||| || | ||| ||||| | ||||||| | |||| ||| | | Sbjct 13488 GTTGGCATTGGTGCAACTAGTAAGGAGTTTCTTACACCATGTTCTTTGATATTAGCGCGT 13429 Query 75875 AGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | | |||||||||| |||| ||||| || | ||| | ||| ||||| |||| Sbjct 13428 AATCCTGCCCAATCCCAACGATCGGATGGAGTGACGTTCCACATATCTGGTTGTAAAATT 13369 Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGT--CCTTTTCAGCTAGTT 75992 || ||||| | || | ||||||| ||| | || | |||| || || Sbjct 13368 CCTTTGCTTACTGGACTGCCTTCGTATGTTTTGTATGGACCAAAACGTTTT--GCCTCTT 13311 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 | || ||| ||| || | | ||||| ||||| || || | || || | || Sbjct 13310 CACATGACGCACTTAATGCTGCAAAGTAAATCGTTTCAAAGATGTCTTTGTTCAA---TT 13254 Query 76053 GCGCTTCAA---GACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109 || | || | || ||||| || | | | |||||||||||||||| || | Sbjct 13253 GCAATGCAGCTGGGCTTTCAAATGGCATGCGCATCATGATAAATGCATCTGCTAAACCTT 13194 Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169 ||||||| | |||||| ||||| |||||| |||||| |||||||||| | |||| Sbjct 13193 GAACTCCTAAACCAATTGGTCTGTGTCTCAAGTTGGAATATTCAGCTTCTTTTACCGGGT 13134 Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTA 76229 | |||| | ||| |||| ||| | ||| | ||| | | || | ||| || Sbjct 13133 AGAAATTTACATCAATAACACGATTCAAATTGATAGTGACTTGTCTTACAATGTCAAATA 13074 Query 76230 G--TTTGAGAAAATCAAA------TTTTCCA--TCTATCA---CAAACATATTAAG--AG 76274 |||| |||| | || || ||| || ||| | | ||| || | || Sbjct 13073 ACATTTG-GAAATTGTAAACTGGCTTGTCCTCGTCGCTCATGTCCACCATTTTTGGTAAG 13015 Query 76275 CT-ATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCC 76333 | |||||||||| |||||||| || | |||| || | ||||| || ||||| Sbjct 13014 CAGATAGATGCTAAGTTACAAACAGCAATTTCATCAGGTGCAGTATATTCGATGATCTCA 12955 Query 76334 GTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACAT 76393 ||||||| |||||||| || || ||||| | |||||||| ||| || |||||| Sbjct 12954 GTGCATAAATTACTACTTTTAATCGTTCCCAAGTTTTGTTGATTGGATTTACGATTACAT 12895 Query 76394 GAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTT- 76452 | || || || | | | || || || ||||||| || ||| || || ||| Sbjct 12894 GCATCTTTGTACAACATGTATGGCGTACCTGTTTCAACTTGACTTTCAATGAT---TTTA 12838 Query 76453 --CCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTC---TCTCTTTCATATTGT 76507 ||| | | ||| | | || | | |||| | ||| ||| |||||||||| Sbjct 12837 AACCATA--ATTCTTG-TGCACGTACGGTTCTGTAACCCTTGCCTTCTTTTTCATATTGA 12781 Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567 || || ||| |||| || ||||| |||| |||| || | |||| || Sbjct 12780 TGGTACAATGCTTCGAATTTCTCACCCCACGTCTCATGCAAATCACGTGCAACATTTGGG 12721 Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627 || | ||||| ||| | |||||| | | || |||||||| || | ||| || ||||| Sbjct 12720 CAAAACAATGTCCATTGTCCATCTGCTTGTACACGTTTCATGAATAAATCTGGAATCCAC 12661 Query 76628 AGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAAGATC 76686 | ||| || | ||| || | | | | || ||||| || ||| ||||||||||| Sbjct 12660 ATTGCATAGAACAAATCGCGTGCACGTGCATT-TTCATCACCATGATTTTTTTTAAGATC 12602 Query 76687 TAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCG 76746 || ||||| | | ||||| |||||||||||| | || || || | | ||| || Sbjct 12601 TAAAAACTCGAAGACATCAGCATGCCATGGTTCCAAGTAAATAGCAAAAGAACCTTTTCT 12542 Query 76747 TTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAAT 76806 |||| || || || |||| || | || || | ||| | ||||||| |||||| | Sbjct 12541 TTTACCGCCACCTTGGTCTACGTAACGTGCGGTATCATTGAATACTCTCAGCATTGGGAC 12482 Query 76807 AATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACT 76866 ||| || ||| || |||||||| || || ||||||||| ||| || || Sbjct 12481 AATTCCATTACTTGAGCCATTTGTACCGCGGATGTAACTTCCAGTACTACGGATGTTGTG 12422 Query 76867 AATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926 || | | || || || || || |||| |||| | ||||| ||| || || || Sbjct 12421 AACACTCAATCCAATACCACCAGCATATTTACTGATTTGCGCACAAGATTTTAACGTATC 12362 Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986 ||| || || | || |||||| |||| || | ||| || | || ||| | Sbjct 12361 ATAAATACCTCCAATGGAATCATCTTTCATTGCAACCAAAAAGCATGATGCCAATTGTGG 12302 Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC--CATTTT--TCAG 77042 | || || ||||| |||||||| || | |||||| || ||| |||||| ||| Sbjct 12301 GCGTGGGGTACCAGCATTGAACAATGTCGGCGTTGCATGGGTAAACATCATTTTACTCAT 12242 Query 77043 AAAGTAGATTGTATGTTTCAATA--ACTGCTTCTATATC-CCATTGATGAATTCCTACAG 77099 || || |||||| |||| |||| || ||||| | ||| ||||| || || | Sbjct 12241 CAA----ATCGTATGTGATAATAGCACTG--TCGATATCTTCCTTG-TGAATACCAACTG 12189 Query 77100 CGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGT 77159 | |||||||| | |||||| || |||| ||| ||| | | | ||||||||||||||| | Sbjct 12188 CAACACGCATAATCATATGTTGTGGTCTTTCAACAATTTCACCATTTATTTTCAACAAAT 12129 Query 77160 ATGATTTTTCCAAAGTTTTAAAACCAAAATA 77190 ||| ||| | ||||| |||||||| || Sbjct 12128 ATGCACGTTCTAGCGTTTTGAAACCAAAGTA 12098 >seq8698 Length=1787 Score = 223 bits (246), Expect = 5e-53 Identities = 630/947 (67%), Gaps = 43/947 (5%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG--TGACATAACTCCCATTTT 46340 ||||||| || ||| |||||||| || | |||||||| | ||| | ||| || Sbjct 851 TTTAAAAATCACAATCCAAAGAAAATTGTTGATCTTCTTCACTTACACCAACACCAGCTT 910 Query 46341 TTGG-TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 ||| ||||| ||||||||||| || ||||| || ||||| |||| ||| || || ||| Sbjct 911 TTGAATATTCGCCTACACGTTTTTCAAAAAAGTTGGTTTTACCTTGCAAGGAGATCATTT 970 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 |||| |||| || || || | |||| || ||||| | |||||| || | || Sbjct 971 CCATCCAATCGAATGGGTTGGATGCATTGTACATTTTAGATACACCTAATGCTTGTAACA 1030 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 | ||| || |||||| || || ||||| | | ||||| || || | || Sbjct 1031 AACGATCAGCGCAGAATTCAATGTATTGGCACATCAATGTTGAGTTCATGCCAATCAATT 1090 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCAT--CCGATATTAT 46577 || |||| | | | | ||| ||| ||| || || |||| ||||| | | Sbjct 1091 CAACTGGTAATGATTGGGAGACAAATACTTTTTCGATTTCAACCGCATTGCCGATGAT-T 1149 Query 46578 CGATGTTACTGTTTCCTCACTTGGTG---GATGCATCAAATG---TTTAAACATTAAACA 46631 ||| | |||||||| |||| ||| | ||||| ||| | | ||| || Sbjct 1150 GAATGAATC-GTTTCCTC---TGGTAAACGATTTACTAAATGATCTTTGTATAATAAGCA 1205 Query 46632 TGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCC 46691 ||| ||||||||||| | |||||||| | ||| |||||||| ||||| | || Sbjct 1206 TGCGAAATCACAATGCAAACCTTCATCACGTGAAATCAATTCGTTTGAAAAACATAAACC 1265 Query 46692 AGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATAT 46751 ||||| | ||||| ||||| | |||||| | || ||| || ||| ||||| || Sbjct 1266 TGGCATCATACCACGTTTTTTTAACCAAAACACGGCACAGAAGGAACCACTGAAGAAGAT 1325 Query 46752 GCCTTCTACA-GCCGCGAATGCGACAAGTCTCTCTCCGTAAC-------TGGCATCATTA 46803 ||||| ||| || |||||||| || | | |||| || ||| || | | || Sbjct 1326 ACCTTC-ACACGCAGCGAATGCAACGACGCGCTCTGCG-AACGATGCGTTGTCTGCGTTG 1383 Query 46804 TGAATCCACCTTTGAGC-CCAATCAGCCTTTTTCTTT-ACACAAGGCATTGTTTCTATAG 46861 |||| | ||| ||| || || ||||||||| || | ||||| || |||| Sbjct 1384 G---TCCAACGCA-AGCACCATTCTGC-TTTTTCTTTGACGGCATCGATTGTATCAATAG 1438 Query 46862 CATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921 |||| || | | ||||||| || || || || || |||||||| | || Sbjct 1439 CATTCAACAAACGCGTTTTTTCTGGACCATTACGAATGTAAGTGTCTATTAACAAGGAAT 1498 Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 ||| ||||| |||||| ||||| ||||| || ||||| || || ||||| | |||||||| Sbjct 1499 ACACTTCTGCATGAATATTTTCGATAGCGATTTGAAAGCCATAGAAACAACGTGCTTCAG 1558 Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAG--ACAAATTCTCATTCACTATTCCATCACT 47039 | || || || | |||| ||||| ||||||| || || || || || || Sbjct 1559 GCACTTGCACTTCGTTGGAAAA--GTTCATCAACAAATTTTCGTTTACAATACCGTCGGA 1616 Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAATA---TTTTTCATCGGTAGTCAGTTT 47096 ||||| |||||||||||||| | |||| || || || | |||| ||| ||| Sbjct 1617 TGCAGCGAAAAATGCCAATACGTTGCTAATGAAGTAACGTTCGTTATCG---CTCATTTT 1673 Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156 || ||| || || ||||| || | |||| ||||| || |||||||| || || || Sbjct 1674 ATCCCAATCTTTCGCATCTTGTGCCAAGTCTAACTCTTCCGCAGTCCAGAAAGATGCTTC 1733 Query 47157 TGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAA 47203 |||||||||||||| | ||| |||||| || ||| || || |||| Sbjct 1734 AGCTTTTTTATACATTTGCCAAATATCATTATGTTGAATTGGGAAAA 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712852893774720