Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq810 87.8 4e-12 >seq810 Length=26514 Score = 87.8 bits (96), Expect = 4e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATCTTCTAGGC 151959 ||| | ||| | ||||||||||||||||| || |||| || | |||||||| | Sbjct 7719 ATGTAAAGTTGCTTCTTTTTGGATGTTGTAGTC-ACTAAGTGTACGTCCATCTTCCAATT 7661 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || || |||||||| | || || || | | |||||||| || |||||||| | Sbjct 7660 GTTTACCTGCAAAGATAAGACGTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGAATCT 7601 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 ||||||| || | || | | || || ||||| ||||| || || ||||| || | Sbjct 7600 TTTGTTTTACGTTTTCAATAGTATCAGATGGTTCTACATCAAGGGTGATGGTTTTACCAG 7541 Query 152080 TGAGAGTCTTCACGAAGACCTGCAT 152104 | | ||| || ||||| | ||||| Sbjct 7540 TCAAAGTTTTTACGAAAATTTGCAT 7516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153685591672966