Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq790 86.0 8e-12 >seq790 Length=27566 Score = 86.0 bits (94), Expect = 8e-12 Identities = 176/259 (68%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 156193 CACCCACATATTTGTTTAATAATTCAGGACCGTTAACTATTTTGACGGGTCGTGATTTAA 156252 |||| || ||||| ||||| | |||||| || || | ||||| || | || ||| | Sbjct 7330 CACCGACGTATTTATTTAAAATTTCAGGCCCATTGATAATTTTTGGCGGCCTTGCTTTCA 7271 Query 156253 AAGCTTGAGCGATACAGCGAGCCATTAATGTTTTACCGCACCCAGGAGGTCCGTATAACA 156312 | |||| | | || || || ||||||||||| || || ||||| || |||||||| | Sbjct 7270 ATGCTTCACCAATTTTACGTGCAATTAATGTTTTCCCACAACCAGGTGGACCGTATAATA 7211 Query 156313 ATACTCCTTTTATATGTTTACAACCTAATTTTTCAGTTATTTCTACCGGAACTGATCTGG 156372 | | ||||| | |||| | || || ||||| | | ||| ||| | | | Sbjct 7210 AAATACCTTTCACATGTCGAATTCCCAACTTTTCTATCACATCTTTAGGATATACACGTG 7151 Query 156373 AAGCAAATGCTCTTCGAAAAATGAGAGAAAATTCTTTATCCAATCCCCCCACACCCATTT 156432 |||||||||| | |||||||| ||||||||| | || || || | ||||||| Sbjct 7150 AAGCAAATGCACGACGAAAAATTTCTTTAAATTCTTTGCCTAAACCACCAATGCCCATTT 7091 Query 156433 CCTCAAAATTCCA-ATTTA 156450 || |||| || | ||||| Sbjct 7090 -CTAAAAAATCAATATTTA 7073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666998936627760