Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq6148 95.1 1e-14 >seq6148 Length=2258 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| | || || | ||||| |||||||||||| ||| |||||| Sbjct 1347 AAGATGCAAATTTTCGTAAAGACTCTTACGGGTAAAACCATTACCCTCGATGTGGAACCA 1288 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 || || | | | | |||||||| || || || |||||| | ||| ||| Sbjct 1287 AGTGACACCATCGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATCCCCCCTGAT 1228 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | |||||||| || || |||||| |||||||| | || || || ||| Sbjct 1227 CAACAACGTCTTATCTTCGCCGGAAAACAATTGGAAGATGGCCGCACCTTGAGTGACTAC 1168 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGT 29170 || || || |||||| | || |||||| |||| Sbjct 1167 AACATCCAAAAGGAAGCCACCCTTCACTTGGT 1136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428298998194640