Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6148 113 7e-20 >seq6148 Length=2258 Score = 113 bits (124), Expect = 7e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || || ||||| || || | || | ||| ||| | Sbjct 1344 ATGCAAATTTTCGTAAAGACTCTTACGGGTAAAACCATTACCCTCGATGTGGAACCAAGT 1285 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | || || || || || || || |||||||| || ||||||||| Sbjct 1284 GACACCATCGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATCCCCCCTGATCAA 1225 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| || || ||||||||||| || ||| | || || || || || || Sbjct 1224 CAACGTCTTATCTTCGCCGGAAAACAATTGGAAGATGGCCGCACCTTGAGTGACTACAAC 1165 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || ||||| ||| | || | || |||||| | ||| | || ||||| Sbjct 1164 ATCCAAAAGGAAGCCACCCTTCACTTGGTTCTTCGTCTTCGTGGTGG 1118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755389066598400