Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1992 118 9e-22 seq6558 102 7e-17 >seq1992 Length=1353 Score = 118 bits (130), Expect = 9e-22 Identities = 157/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || | |||||| || || |||||||| || ||||| || || Sbjct 872 CACCAAGTGCAACGTGGCCTCTTTCTGTATATTGTAATCCGACAGCGTGCGGCCGTCTTC 931 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | |||||| || || | || | ||||| ||||||||||| ||||| ||||||||| Sbjct 932 CAACTGTTTCCCCGCAAAAATCAACCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCTTG 991 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||||| || || | || | ||||||| | |||||| || | ||| | || || Sbjct 992 AATCTTTTGCTTCACATTCTCAATCGTGTCCGAGGGCTCGACATCCAAGGTTATGGTCTT 1051 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAT 118745 ||||| || || || || ||||| ||||||| |||| Sbjct 1052 CCCGGTAAGGGTCTTGACGAAAATTTGCATGG-TTAT 1087 >seq6558 Length=25225 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || | ||| || ||||||||||| ||| | || || ||||| | ||| Sbjct 2730 GTGGAGGGTGGCCTCCTTCTGAATGTTGTAGTCGGAGAGCGTTCGGCCGTCCTCCAACTG 2671 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||| || || | || | || || || ||||| || || || |||||||| ||| || Sbjct 2670 TTTCCCCGCAAAAATCAACCGTTGTTGGTCGGGGGGGATCCCTTCCTTGTCCTGAATCTT 2611 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || || | || | |||||||| | |||||| || | ||| | ||| || || || Sbjct 2610 TTGCTTGACGTTCTCAATGGTGTCCGAGGGCTCGACGTCCAAGGTAATCGTCTTCCCCGT 2551 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCTT 118743 || ||||| ||||| |||||||||| || Sbjct 2550 CAACGTTTTCACAAATATCTGCATGGTTT 2522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433792923560896