Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1992 87.8 2e-12 >seq1992 Length=1353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 |||||| || || || || ||| | ||||| || || |||||| | |||||||| | Sbjct 1082 CATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACCATAACCTTGGATGTCGAGCCCTC 1023 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 |||| | || | ||| ||| |||| ||| | || |||||| | || || || Sbjct 1022 GGACACGATTGAGAATGTGAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCA 963 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 || || || || | |||||| ||||| ||||||| | || || ||||||| Sbjct 962 ACAGCGGTTGATTTTTGCGGGGAAACAGTTGGAAGACGGCCGCACGCTGTCGGATTACAA 903 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 |||||||||||||||||| | || || ||| | || | ||||| || Sbjct 902 TATACAGAAAGAGGCCACGTTGCACTTGGTGCTTCGCCTTCGCGGGGG 855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418267864808960