Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6531 118 2e-22 >seq6531 Length=27152 Score = 118 bits (130), Expect = 2e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || ||||| |||| |||||| |||||||||||||| |||||||||||||| ||| Sbjct 27007 GCCAAACGTCACCGCAAGGTTCTTCGTGATAACATCCAAGGTATCACCAAGCCAGCCATC 27066 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| | |||||||||||||| || || || ||||||| | |||| ||||||| Sbjct 27067 CGTCGTTTAGCTCGTCGTGGTGGTGTAAAACGCATCTCTGGTCTTATCTACGAAGAGACC 27126 Query 16553 CGTGATGTTTTGAAGATCTTCCT 16575 |||| || | ||| | ||||| Sbjct 27127 CGTGGCGTACTCAAGGTATTCCT 27149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068719391984