Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3675 212 2e-49 >seq3675 Length=4586 Score = 212 bits (234), Expect = 2e-49 Identities = 603/917 (66%), Gaps = 10/917 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | || || |||||| ||||||| | ||||| || | || || || Sbjct 646 TTCGGGTTCAAAACCTTGGAGAGGGCCTACCTTTTGAAGATCAACGGCCAGATCGTCGAG 705 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||||||||| ||| | ||||| ||| | || |||||||| |||| | || Sbjct 706 CGCCCGCAGCACATGCTCATGCGCGTTTCCATCGGTATCCACAAAGCGGACATCGAGCGA 765 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAA 363568 ||||| || || || || ||| | | || | |||| ||||| ||||||||||| || Sbjct 766 GCGATCGAGACCTACAA-CTTG-ATGAGCAACATGTACTTCACTCACGCCACGCCGACCC 823 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| || || || | || ||| | | || ||||| | || | ||||||| Sbjct 824 TCTTCAACGCCGGGACCCCACGCCCGCAGCTCGCCTCGTGCTTCTTGCTGACCATGAAGG 883 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| |||||| || |||| ||||| | ||| || || || |||| | | Sbjct 884 ACGACAGCATCGAAGGGATCTACGACACCTTGAAGTCCTGCGCCTGCATCAGCAAGTACG 943 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCA 363748 | || || || ||| |||| |||||| |||| | || ||| |||||||| |||| Sbjct 944 CCGGGGGCATCGGTCTATCCATCCACGGCATTCGCTCCCAAGGCAGCTACATTCGGGGCA 1003 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 | || | | || || | | |||||||| || || || || | || || ||| Sbjct 1004 CCAACGGTTCCAGCAACGGCATCATCCCCATGCTGCGCGTCTTCAACGACACCGCACGGT 1063 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 |||||||||| || ||||| |||||||| || |||| || ||||| || ||||| | Sbjct 1064 ACGTCGACCAAGGCGGAGGCAAGCGCAAGGGCTCGTTCGCCATGTACCTTGAGCCGTGGC 1123 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | || || |||||||||| | || | ||||||| || | ||| | || | Sbjct 1124 ACGCGGACGTTTTTGAGTTCTTGGATTTGAAGAAAAACCACGGTGACGAGAACGCCCGCG 1183 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988 | || || |||||||| || | ||| | | |||| ||| ||||||||||| || | | Sbjct 1184 CCCGCGACCTGTTCTACGCGATGTGGATCCCAGACCTTTTCATGAAGCGCGTACAGTCCG 1243 Query 363989 GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAG--GTCTTTCCGATGTATGGGG 364046 | | ||| | | || || || ||| || || | || ||| ||||| Sbjct 1244 ACGGGCAGTGGACCTTGTTCTGTCCCAACG--TGGCCCGTAACCTGCACGAAACCTGGGG 1301 Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACAA 364105 || || | | | | |||| ||||| || | ||||| ||||| | ||||| | Sbjct 1302 CGAGGAGTTCGAAACCTTGTACGCCAAGTACGAGGCAGAGGGCAAAGGGT-TCAAGACCA 1360 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | | ||| ||| | | ||||| ||| | || || | || || |||||||| | Sbjct 1361 TCCGCGCCCAGGAATTGTGGTTCAAAATCCTTGAAAGTCAAGTAGAAACCGGAACACCGT 1420 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 | ||| | ||||| || || ||||||||||| ||||||||| || | || || ||| Sbjct 1421 ACATGCTCTACAAGGACTCTTGCAACCGCAAAAGCAACCAGCAAAACTTGGGAACTATTA 1480 Query 364226 AGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 | ||| ||| | || || ||||| || | ||||| || || ||||||| |||||| | Sbjct 1481 AATCGAGTAACTTGTGCACGGAGATCATCCAGTACACTGCCCCGGACGAGATTGCCGTTT 1540 Query 364286 GTAACCTTGCGTCGATC 364302 | ||| | ||||| ||| Sbjct 1541 GCAACTTGGCGTCCATC 1557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303235235942816