Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq3204 91.5 7e-14 >seq3204 Length=5505 Score = 91.5 bits (100), Expect = 7e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 38977 TCACCGCGATGGAAGAGTACGCCAGCGGAGCTGGCTACGAAGGAAGGCTTGATCTAGGCA 39036 ||| | | |||||||||||||||||||| || | |||||| || || || || || | Sbjct 4704 TCAACACCATGGAAGAGTACGCCAGCGGGGCCGCCTACGAGGGCCGGGGAGACCTTGGAA 4645 Query 39037 ATACTCAGCCTGGAGACGGAGTGCGCTACAAGGGCCGAGGCCCTATCCAGCTCACGGGTA 39096 | || ||||| || |||||| |||||||||||| || ||| || ||||| || || Sbjct 4644 ACACACAGCCAGGCGACGGAAAGCGCTACAAGGGTCGTGGCTACATACAGCTGACCGGCC 4585 Query 39097 GGTCCAACTATCGAGCCTTT 39116 | ||||||| || ||||| Sbjct 4584 GCGCCAACTACCGCACCTTT 4565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225708500486720