Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6148 131 7e-25 seq1888 86.0 2e-11 >seq6148 Length=2258 Score = 131 bits (144), Expect = 7e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 391037 ATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096 || ||||| | ||| | |||||||| || || || || |||||||| ||||| || || Sbjct 1357 ATTTTATAACAAGATGCAAATTTTCGTAAAGACTCTTACGGGTAAAACCATTACCCTCGA 1298 Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156 ||| ||| || ||| | ||| ||| | || ||||| || || || |||||||| || Sbjct 1297 TGTGGAACCAAGTGACACCATCGAAAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTAT 1238 Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTT 391216 || ||||||||||||||| | || ||| | || |||||| | |||||||| | || || Sbjct 1237 CCCCCCTGATCAACAACGTCTTATCTTCGCCGGAAAACAATTGGAAGATGGCCGCACCTT 1178 Query 391217 GGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 | || || || || | ||||| || || |||||||| || Sbjct 1177 GAGTGACTACAACATCCAAAAGGAAGCCACCCTTCACTTGGT 1136 >seq1888 Length=501 Score = 86.0 bits (94), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| |||||||| || || || ||||| || || | Sbjct 135 ATGCAAATTTTCGTAAAAACGTTGACGGGTAAAACCATCACGCTCGATGTGGAGCCAAGT 76 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || ||||| || || || |||||||| || || ||||||||| Sbjct 75 GATACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATCCCCCCTGATCAA 16 Query 391170 CAACGTTTAATTTTC 391184 || ||| | || ||| Sbjct 15 CAGCGTCTTATCTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975538975133504