Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4745 87.8 1e-11 >seq4745 Length=3458 Score = 87.8 bits (96), Expect = 1e-11 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862 || || | |||||| ||||| ||||| || |||||||| | || || || ||||| ||| Sbjct 1932 GTAGACTTTTCTTCCCCAAACATTGCGAAGGAAATGCACGTGGGCCACTTGAGATCCACT 1991 Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGA-AATGTGTGGACACGATGTTTATCGTAT 870921 |||||||| ||| | || || | |||| || | | | || ||||||||| || || Sbjct 1992 ATTATTGGGGAAACGATCTGCCGAATATTGGAGCACGCG-GGGCACGATGTTCTGCGCAT 2050 Query 870922 TAATCATGTGGGTGATTGGGGAACTCAATTCGGTATG 870958 || || ||||| |||||||| || ||||||||| Sbjct 2051 CAACCACACCGGTGACTGGGGAACGCAGTTCGGTATG 2087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780470670092128