Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3675 111 2e-19 >seq3675 Length=4586 Score = 111 bits (122), Expect = 2e-19 Identities = 219/321 (68%), Gaps = 5/321 (2%) Strand=Plus/Plus Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGG 111983 || || || || ||||| ||||| || |||| ||| || || || || |||||| || Sbjct 1021 GGCATCATCCCCATGCTGCGCGTCTTCAACGACACCGCACGGTACGTCGACCAAGGCGGA 1080 Query 111984 CGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | |||||||| || |||| | || |||||||| ||||||||||| | | ||| Sbjct 1081 GGCAAGCGCAAGGGCTCGTTCGCCATGTACCTTGAGCCGTGGCACGCGGACGTTTTTGAG 1140 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCC 112100 ||| | || ||| ||||| ||||| ||| | || || |||||| || |||| | Sbjct 1141 TTCTTGGATTTGAAGAAAAACCACGGTGACGAGAACGCCCGCGCCCGCGACCTGTTCTAC 1200 Query 112101 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGTGGCAATTGGTCTCT 112159 || | ||||| ||||| || ||||||||| | || || || ||| | ||| | | Sbjct 1201 GCGATGTGGATCCCAGACCTTTTCATGAAGCGCGTACAGTCCGACGGGC-AGTGGACCTT 1259 Query 112160 CTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCT 112219 || ||||| || ||| | || ||| || ||| |||||||| ||| || | Sbjct 1260 GTTCTGTCCCAACGTGGCCCGTAACCTGCACGAAACCTGGGGCGAGGAGTTCGAAACCTT 1319 Query 112220 CTACACAAAGTACGAGGAAGA 112240 ||| | |||||||||| ||| Sbjct 1320 GTACGCCAAGTACGAGGCAGA 1340 Score = 95.1 bits (104), Expect = 2e-14 Identities = 277/421 (66%), Gaps = 8/421 (2%) Strand=Plus/Plus Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || |||||||| || ||||| ||| ||||||| |||| || || |||||||| ||||| Sbjct 2017 GCGCCAATGCCGACGGCCTCGACCTCACAAATTATGGGAAACAACGAATGCTTCGAACCA 2076 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030 |||||||| ||||| || ||| | || || ||||||||| | ||||||||| Sbjct 2077 TACACGACCAACATGTACAACAGACGTGTGCTTGCAGGAGAGTTTACGTGCGTCAACAAG 2136 Query 113031 CATCTCGTGGATGACCTCAAAGAGATTGGTC-TCTGG--TCCAAGGATATG-AAGGATCT 113086 || | || |||| | | | | ||| | ||||| ||||| | | || | | Sbjct 2137 CACTTGTTGCGTGACTTGATCGCG-TTGAACATCTGGACCCCAAGCGTGCGCAACCAGAT 2195 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 ||| | | || || || ||||||| || || |||| | | || | Sbjct 2196 CATTG---CCGATGGAGGATCTGTTCAAAACGTTAAGGGCCTTCCCAAGCAGTACAAAGA 2252 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCG 113206 ||||| || || |||||||||| ||| | || || |||||||||||| || Sbjct 2253 TCTGTACAAGACCGTCTGGGAAATCAGCCAAAAGACTATCCTTACCATGGCCGCAGACCG 2312 Query 113207 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTC 113266 |||| ||||| || |||||||||||| |||| | ||| | || | | Sbjct 2313 TGGTGCATTCATCGACCAAAGTCAAAGTTTGAACGTGCACATCGCCGCCCCCTCCACCGG 2372 Query 113267 CAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 113326 ||| | | || |||||| | ||| |||||||||||||| ||||| || ||||| || Sbjct 2373 AAAGTTGACCTCAATGCACTTTTACGCCTGGAAGAAGGGTCTTAAAACCGGTATGTACTA 2432 Query 113327 C 113327 | Sbjct 2433 C 2433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620687402223360