Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6148 113 4e-19 >seq6148 Length=2258 Score = 113 bits (124), Expect = 4e-19 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTA-CTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||| || || | |||||||| ||| |||| | | | ||||| ||| | || | Sbjct 1127 AGACGAAGAACCAAGTGAAGGGTGGCTTCCTTTTGGA-TGTTGTAGTCACTCAAGGTGCG 1185 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| | |||||||||||| || ||||| | ||| |||||||| || || ||||| Sbjct 1186 GCCATCTTCCAATTGTTTTCCGGCGAAGATAAGACGTTGTTGATCAGGGGGGATACCTTC 1245 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || || || ||||| || || || || || ||| | || | || ||||| | Sbjct 1246 CTTGTCCTGGATCTTTTGCTTGACGTTTTCGATGGTGTCACT-TGGTTCCACATCGAGGG 1304 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| |||||||| |||||||| || |||||||||||||| Sbjct 1305 TAATGGTTTTACCCGTAAGAGTCTTTACGAAAATTTGCAT 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028921154593120