Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq3621 349 5e-91 seq6558 140 4e-28 seq1992 127 3e-24 seq4042 100 4e-16 seq6482 96.9 5e-15 seq229 89.7 7e-13 seq3675 84.2 3e-11 >seq3621 Length=4750 Score = 349 bits (386), Expect = 5e-91 Identities = 1050/1612 (65%), Gaps = 33/1612 (2%) Strand=Plus/Plus Query 195284 TACATAATGTCTCAA------GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTT 195337 ||||||||| || || ||| | ||||||||| | || || |||||||| || ||| Sbjct 1098 TACATAATGACTGAAAAAGCAGCTGTAGGTATCGATCTTGGTACCACTTACTCGTGCGTT 1157 Query 195338 GGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACT 195397 |||| ||| | || || || || || || | || ||||| || | ||| || || Sbjct 1158 GGTGCGTGGAAGAACAATGCCGTCGAAATCATTGCCAACGACCAGGGTACCCGCACCACA 1217 Query 195398 CCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAG 195457 |||||||||||||| || || || || ||||| | || | ||||| || || ||| Sbjct 1218 CCATCGTACGTTGCGTTCACCGACTCCGAGCGTCTTATCGGTAACGCCGCCAAGAACCAG 1277 Query 195458 ACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTT 195517 | |||||||| ||| || |||| ||||| |||||| | || || || || ||| Sbjct 1278 GTTTCCATGAACCCACACAACACCATCTTCGACGCCAAGCGTTTGATCGGCCGAAATTTT 1337 Query 195518 TCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG 195577 ||||| | || || | || || ||| ||||| | | | ||| | | | ||| Sbjct 1338 TCGGACCCTGATGTACAGGCGGACATGAAGCACTGGCCCT-TCAAGGT----CAAGAGTG 1392 Query 195578 GCT-----GATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAG--AAACAATTTGC 195630 || | ||||| ||||| || || | || || | ||| || | || | Sbjct 1393 GCACGAACGGAAAGCCAATGATCTCCGTC-AACTACAAGG-GCGAATCCAAGGACTTCGG 1450 Query 195631 TCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCAT 195690 ||||||| || | ||||| | | ||||||||| | || || || ||| | Sbjct 1451 CGCCGAAGAGATCAGTGCCATGGTTCTCACCAAGATGAAGAACGTCGCAGAGTCCTTCCT 1510 Query 195691 GGGTAAAACTGT-GAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 || || || || || || ||| | || || || || ||||| | || || | Sbjct 1511 CGGCCAAGACGTAGACAGC-GCCGTTATCACCGTCCCGGCCTACTTTAACGACGGTCAGC 1569 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 | ||||| || |||||||| | || ||||| || || ||| ||| | |||||||| | Sbjct 1570 GCCAGGCCACCAAGGACGCCGGGGCCATTGCCGGCCTGAACGTCCTTCGTATTATCAACG 1629 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || || || ||||| || ||| |||||||||| || || || || || | Sbjct 1630 AGCCCACCGCCGCGGCCATTGCCTACGGTTTGGACAAGAA---GGGCGGGGAGAAGAACG 1686 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 |||||||||| || || ||||| |||||||| ||||| || || || | || |||| | Sbjct 1687 TATTGATCTTCGACCTTGGTGGAGGTACGTTCGATGTGTCCCTCCTTACCATCGAAGACG 1746 Query 195930 GTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATG 195989 |||| |||||||| ||||| || || || ||||| || |||| || ||||| ||||| Sbjct 1747 GTATCTTCGAAGTTAAGGCCACCGCGGGAGATACCCACTTAGGAGGGGAAGACTTCGACA 1806 Query 195990 CACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTG 196049 || | | | || | |||||| | || ||| ||| || | | Sbjct 1807 ACCGAATGGTAGACTACTTCAAGCAAGAGTTCAGGCGCCGGAACAAGGTCGACTTGGCCA 1866 Query 196050 GAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCT 196109 || | || || || || ||| | ||| |||| ||||||||||| || || | | Sbjct 1867 CCAACGAGCGTGCCCTCCGCCGCCTTCGCACTTCATGCGAACGTGCCAAGCGCACCTTGT 1926 Query 196110 CTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATA 196169 | || | | ||| | | || || || || ||| |||| || |||||| | | Sbjct 1927 CGTCCAGCACGCAAGCCTACATCGAAATCGACTCCTTGCACAACGGGATCGACTTCCAGA 1986 Query 196170 CAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGG 196229 || || |||||||| ||||| |||||| | ||| || | || | ||| |||| Sbjct 1987 GCACCATCACCCGTGCCCGTTTCGAAGAGATGAACATGGACTACTTCCGCAAGACCATGG 2046 Query 196230 AACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTG 196289 | || || || |||| | || ||||| ||||| | ||| ||||| || ||||| | Sbjct 2047 AGCCCGTCGAGAAAGTCATGCGAGACGCCAAGATCGCCAAGGACAAGGTCGACGAAATAG 2106 Query 196290 TCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCA 196349 | ||||| || || || |||||||| || ||||| || ||||| | |||||||| Sbjct 2107 TACTTGTTGGTGGGTCCACCCGTATCCCAAAGATCCAGTCCATGCTGAAGACCTTCTTCA 2166 Query 196350 ATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCG 196409 | || || ||||| | ||||||||||| ||||| ||||| || ||||| ||| Sbjct 2167 ACGGAAAGGACCCGAACAAGAGCATCAACCCGGACGAAGCCGTTGCCTACGGTGCCACCG 2226 Query 196410 TTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTG 196469 | ||||| || || || || || | | ||| | | ||| | ||||| |||| Sbjct 2227 TCCAGGCCGCCATCCTGAGTGGCGTCCAGAGCGCCAACTTGGACGATTTGCTGCTTCTTG 2286 Query 196470 ATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTG 196529 | || | || | ||||| ||| | || || || ||||| || ||||| | | || Sbjct 2287 ACGTAACCCCGCTGTCCCTCGGTATCGAGACCGCCGGTGGCGTCATGACCACGTTGATCA 2346 Query 196530 ATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATC 196589 | | ||||| || | || || |||||| ||| || ||||| |||| || | Sbjct 2347 ACCGCAACACCACCGTCCCAACCAAGAAGAGCCAAACGTTCAGTACGTACGCCGACAACC 2406 Query 196590 AACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATC 196649 | ||||| || || ||||| | || || || ||| || | ||||||||| | Sbjct 2407 AGCCAGGCGTATTGATCCAAGTCTTCGAGGGCGAGCGCGCCATGACCAAGGATAACAACT 2466 Query 196650 TACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTA 196709 | || |||| ||| | ||| || || ||| | || | || || || ||||| Sbjct 2467 TGCTCGGAAAATTCCACTTGGATGGTATCCCACCAATGCCTCGTGGGGTCCCGCAGATCG 2526 Query 196710 ATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTT 196769 | || | ||| || || || || || || || ||||| || || | || ||| | Sbjct 2527 AAGTCACGTACGACATCGATGCCAACGGTATCCTGAACGTTACCGCCGTCGAAAAGAGTA 2586 Query 196770 CTGGC----AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAG 196825 | ||| ||| | ||||| || ||||| ||||| ||||| || || ||||| Sbjct 2587 CCGGCCGCGAAA----ACAAGATCACCATCACCAACGACAAAGGGCGTCTGTCCAAGGAC 2642 Query 196826 GAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| | || || |||||| || || |||||||||| || || ||||||| Sbjct 2643 GAAGTCGAGCGCATGGTTGCCGAGGCCGAAAAGTACAAGGCCGAGGACGAGG 2694 >seq6558 Length=25225 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || ||||||||||| | || || || || || ||| | || || ||| | || Sbjct 2527 ATGCAGATATTTGTGAAAACGTTGACGGGGAAGACGATTACCTTGGACGTCGAGCCCTCG 2586 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| || |||||||| || || ||||| || Sbjct 2587 GACACCATTGAGAACGTCAAGCAAAAGATTCAGGACAAGGAAGGGATCCCCCCCGACCAA 2646 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | |||||||| || |||||| | || || || || || ||| | || |||||| Sbjct 2647 CAACGGTTGATTTTTGCGGGGAAACAGTTGGAGGACGGCCGAACGCTCTCCGACTACAAC 2706 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||| | || || ||||| || || | || ||||| || Sbjct 2707 ATTCAGAAGGAGGCCACCCTCCACCTCGTCCTTCGCCTCCGGGGGGG 2753 >seq1992 Length=1353 Score = 127 bits (140), Expect = 3e-24 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || |||||||| || || || || ||| | || || ||| | || Sbjct 1081 ATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACCATAACCTTGGATGTCGAGCCCTCG 1022 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || ||||||||||| ||||||||||| || |||||||| Sbjct 1021 GACACGATTGAGAATGTGAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAA 962 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | |||||||| || |||||| | ||||| || || || || | |||||||| Sbjct 961 CAGCGGTTGATTTTTGCGGGGAAACAGTTGGAAGACGGCCGCACGCTGTCGGATTACAAT 902 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || || ||| | || | ||| | || || | ||||| || || ||||| Sbjct 901 ATACAGAAAGAGGCCACGTTGCACTTGGTGCTTCGCCTTCGCGGGGGAATGCAA 848 >seq4042 Length=4160 Score = 100 bits (110), Expect = 4e-16 Identities = 160/225 (71%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 171865 CAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGAC 171924 ||||| ||||| | || |||| |||| | || ||||| || || || || ||| Sbjct 2403 CAAATGTTTGTAGAGAC--TTACGGGAAGAGG-ATTACCCTTGACGTCGAACCGAGCGAC 2459 Query 171925 ACAATCGATAACATCAAAGCCAA-GATTCAAGATAAGGAAGGCATTCCACCCGATCAGCA 171983 || ||||| ||| | || || || ||| || || |||||||||||||| || ||||| || Sbjct 2460 ACGATCGAGAACGTGAA-GCAAATGATCCAGGACAAGGAAGGCATTCCCCCGGATCAACA 2518 Query 171984 ACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGT 172043 || ||||| ||||| || || ||||| ||||| || || ||| | | || |||||| | Sbjct 2519 GCGTCTTATCTTTGCCGGGAAGCAGCTGGAAGACGGTCGAACCTTGGGCGACTACAACAT 2578 Query 172044 TCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || || ||| | || | | ||||| || | || || ||||| Sbjct 2579 CCAGAAAGAGGCCACGTTGAATCTTGTCCTTCGACTCCGTGGTGG 2623 >seq6482 Length=32563 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 196278 TTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTT 196337 ||||||| ||||| ||||| || || || |||||||| |||||||| ||| | || Sbjct 7112 TTGATGATATTGTTCTTGTCGGTGGGTCCACCCGTATCCCGAAGATCCAAGCCCTT-TTG 7054 Query 196338 CTAGC-TTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCT 196396 | || |||||||| |||||||| ||| || ||||||||||| || || ||||| Sbjct 7053 CAAGAATTCTTCAAGGGCAAAGATTTGTGCAAGACCATCAACCCGGACGAGGCCGTTGCC 6994 Query 196397 TATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 |||||||| ||| |||| | ||| || ||| Sbjct 6993 TATGGTGCCGCCATTCAAGGTGCCATCCTC 6964 >seq229 Length=1895 Score = 89.7 bits (98), Expect = 7e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 || ||||| || || || ||||| || || || || || || | || || ||| || Sbjct 682 ATACAAATTTTCGTAAAGACCCTGACCGGTAAGACGATTACTTTGGACGTGGAGCCGAGC 741 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| |||| ||| |||| |||||||| || || ||||| | | || ||| | Sbjct 742 GACACGATCGTGAACGTCAAGCGAAAGATTCAGGACAAAGAAGGTACCCAACACGACAAA 801 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || ||||| ||||| ||||| || || | ||| || |||||| Sbjct 802 CAGCGGCTGATCTTCGCCGGTAAGCAGCTGGAAGACGGGCGAAACCTGAGCGACTACAAC 861 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| || || | || || || || | || | |||||||| || Sbjct 862 GTTCAGAAAGAAGCCACGCTGCATCTGCTACTCCGCCTTCGGGGAGG 908 >seq3675 Length=4586 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/210 (69%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 78263 GGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGT 78322 || || || || ||||| | || ||||| | || ||||| || ||| |||||| || Sbjct 1021 GGCATCATCCCCATGCTGCGCGTCTTCAACGACACCGCACGGTACGTCGACCAAGGCGGA 1080 Query 78323 CGTAGG---AAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGAT 78379 | | | ||||| || ||||| ||||||||||| || |||||||| || || | || Sbjct 1081 GGCAAGCGCAAGGGCTCGTTCGCCATGTACCTTGAGCCGTGGCACGCGGACGTTTTTGAG 1140 Query 78380 TTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACT 78439 || ||||| | ||||| ||||||||| | || || | | || | ||| Sbjct 1141 TTCTTGGATTTGAAGAAAAACCACGGTGACGAGAACGCCCGCGCCCGCGACCTGTTCTAC 1200 Query 78440 GCTATGTGGATTCCGGATCTTTTTATGAAG 78469 || |||||||| || || ||||| |||||| Sbjct 1201 GCGATGTGGATCCCAGACCTTTTCATGAAG 1230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657804113391360