Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3919 86.0 9e-12
>seq3919
Length=4506
Score = 86.0 bits (94), Expect = 9e-12
Identities = 236/362 (65%), Gaps = 0/362 (0%)
Strand=Plus/Minus
Query 18386 TCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAAC 18445
|| || ||||| | ||| ||| |||||||| || ||| || || ||||| || |
Sbjct 872 TCGATGGCATTCAGCAACCTATCCTTTTCTTTTCCATTTTTAATGTACGTGTCAATAAGA 813
Query 18446 AAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTA 18505
| ||| || | ||| | || ||| |||| || |||||||| || | || || | ||
Sbjct 812 AGAGAGTATACTTCTGCGTGGATGTTTTCAATGGCTATCTGGAACCCGTAGAAGCACCTT 753
Query 18506 GCCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCG 18565
||||| || ||| | ||| | | || | | || ||||| || || || |||
Sbjct 752 GCCTCCGGCAGTTGGACTTCGTTCGAGAAGTTCATCAACAGGTTCTCGTTTACAATGCCG 693
Query 18566 TCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA 18625
|||| | ||||||||| |||| || | | ||||| ||| || ||| | |
Sbjct 692 TCAGAGGCTGCGAAAAAGGCCAGGACGTTGCTGATGAAGAACCGTTCGTTGTCCGTCATT 633
Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685
|| | ||| || | | |||| || | || | ||||||| ||||| || || | |
Sbjct 632 TTATCCCAGTCTTTACTGTCTTGTGCCAAGTCCAGCTCTTCCGCAGTCCAGAACGAGGCT 573
Query 18686 TCGGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGT 18745
|| || | ||||||||||| ||||||| | || || || || || || | |||||
Sbjct 572 TCAGCTTTTTTGTACATTTGCCAAATATCGTTGTGCTGGATCGGGAACAAAACGAATCGT 513
Query 18746 TT 18747
||
Sbjct 512 TT 511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731807156140800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |