Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq185 89.7 2e-12 >seq185 Length=14135 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/135 (77%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 252557 CATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGAGACTGAT 252616 |||||| ||||| ||||||||||||||||| |||||||| || ||||| |||||||| | Sbjct 10294 CATACACGCCAAGGGCCTGCTTTCCCATAGCGCTCTGGTACGTGTTTCTTGGAGACTGGT 10235 Query 252617 TGTTTTCCGGGAAAGGAATGCATGATGCTACA-ACACCGA-AGATAGTGCTTGGGTGAAT 252674 ||| || || || ||||| || || ||| | ||||| | | ||| | |||||| Sbjct 10234 TGTGGTCTGGAAATGGAATTATAGACGC-ACAGATACCGAGAAGCATTGC-CGTGTGAAT 10177 Query 252675 TTCACAGTGACTGTA 252689 ||||||||| |||| Sbjct 10176 TTCACAGTGGGTGTA 10162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471683936884656