Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3675 141 1e-27 >seq3675 Length=4586 Score = 141 bits (156), Expect = 1e-27 Identities = 271/397 (68%), Gaps = 27/397 (7%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| || || |||||||| |||||||| |||||||| | || ||||||| | Sbjct 1073 TGGTCGACGTACCGTGCGGTGTCGTTGAAGACGCGCAGCATGGGGATGATGCCGTTG--C 1016 Query 1630126 TCG--CCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGC 1630183 | | |||||||||||| | |||| ||| || ||| | ||| || | | Sbjct 1015 TGGAACCGTTGGTGCCCCGAATGTAGCTGCCTTGGGAGCGAATGCCGTGGATGGATAGAC 956 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 ||||||| ||||| ||||| |||| ||||| || | ||||||||||| || | Sbjct 955 CGATGCCCCCGGCGTACTTGCTGATGCAGGCGCAGGACTTCAAGGTGTCGTAGATCCCTT 896 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| |||| |||||||| || | |||||||| | | |||||| | | || | Sbjct 895 CGATGCTGTCGTCCTTCATGGTCAGCAAGAAGCACGAGGCGAGCTGCGGGCGTGGGGTCC 836 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAAC-TGCCGCGACATGGCGTCGTAG 1630362 ||||||||||||| || ||||| || ||||| || || || ||| || |||| Sbjct 835 CGGCGTTGAAGAGGGTCGGCGTGGCGTGAGTGAAGTACATGTTGC-TCATCAAGTTGTAG 777 Query 1630363 GTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGG---CCGATG 1630419 || ||| | | ||| || | ||| | | | |||| |||||| Sbjct 776 GTCTCGATCGCTCGC------------TCGATGTC------CGCTTTGTGGATACCGATG 735 Query 1630420 GCGACGCGCATGAGCATGTACTGGGGCCGCTCGACGA 1630456 | |||||||||||||||| ||| || |||||||||| Sbjct 734 GAAACGCGCATGAGCATGTGCTGCGGGCGCTCGACGA 698 Score = 87.8 bits (96), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||||| ||||| || |||||||| || ||| | ||| | |||||||| || || | Sbjct 1210 TCCACATCGCGTAGAACAGGTCGCGGGCGCGGGCGTTCTCGTCACCGTGGTTTTTCTTCA 1151 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 || | | || | || ||| |||||||||||||| ||||| ||| || | ||||| Sbjct 1150 AATCCAAGAACTCAAAAACGTCCGCGTGCCACGGCTCAAGGTACATGGCGAACGAGCCCT 1091 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||||||| ||||| Sbjct 1090 TGCGCTTGCCTCCGCC 1075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106557525526896