Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1992 89.7 4e-13 >seq1992 Length=1353 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | || || || ||||| ||| | || ||| | Sbjct 1081 ATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACCATAACCTTGGATGTCGAGCCCTCG 1022 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||||||| || || |||||| | || ||||| Sbjct 1021 GACACGATTGAGAATGTGAAGCAAAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAA 962 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | | |||| |||||| |||||| |||| |||| | || || |||| ||||| Sbjct 961 CAGCGGTTGATTTTTGCGGGGAAACAGTTGGAAGACGGCCGCACGCTGTCGGATTACAAT 902 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || || || ||| | ||||||||| ||||| | | | || ||||||| Sbjct 901 ATACAGAAAGAGGCCACGTTGCACTTGGTGCTTCGCCTTCGCGGGGGAA 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398842343027632