Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_026598.1 Length=58211 Score E Sequences producing significant alignments: (Bits) Value seq3204 86.0 2e-12 >seq3204 Length=5505 Score = 86.0 bits (94), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 23841 CATGGAGGAAATCGCCGACGGCAGCGCCTACGAGGGCCGCCTCGACCTGGGCAACACGCA 23900 |||||| || |||| ||| ||||||||||||||| ||||| || ||||| || Sbjct 4697 CATGGAAGAGTACGCCAGCGGGGCCGCCTACGAGGGCCGGGGAGACCTTGGAAACACACA 4638 Query 23901 GCCGGGCGACGGTAAGCGGTTCAAGGGCCGCGGCCCTATCCAGATCACCGGCCGGTCGAA 23960 ||| |||||||| ||||| | |||||| || ||| || ||| | |||||||| | || Sbjct 4637 GCCAGGCGACGGAAAGCGCTACAAGGGTCGTGGCTACATACAGCTGACCGGCCGCGCCAA 4578 Query 23961 CTACACGCGCCT 23972 |||| ||| ||| Sbjct 4577 CTAC-CGCACCT 4567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186137931451488