Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6148 131 2e-25 seq3675 125 7e-24 seq6558 122 9e-23 seq1992 120 3e-22 seq229 104 2e-17 seq4042 100 3e-16 seq1888 87.8 2e-12 >seq6148 Length=2258 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || |||| ||||||||| ||||||||||| | | |||| | || || | || Sbjct 1141 GTGAAGGGTGGCTTCCTTTTGGATGTTGTAGTCACTCAAGGTGCGGCCATCTTCCAATTG 1200 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || || || | ||| || ||||| || || || ||||| || || || || || Sbjct 1201 TTTTCCGGCGAAGATAAGACGTTGTTGATCAGGGGGGATACCTTCCTTGTCCTGGATCTT 1260 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| ||||| || | ||||| | |||||| ||||| |||||||||||||| || Sbjct 1261 TTGCTTGACGTTTTCGATGGTGTCACTTGGTTCCACATCGAGGGTAATGGTTTTACCCGT 1320 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 | ||| || |||||||||||||| ||||| Sbjct 1321 AAGAGTCTTTACGAAAATTTGCATCTTGTT 1350 >seq3675 Length=4586 Score = 125 bits (138), Expect = 7e-24 Identities = 1010/1610 (63%), Gaps = 59/1610 (4%) Strand=Plus/Plus Query 7709 CCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGC 7768 ||||||| || ||||| |||||| || ||||||||||| || || ||| |||| || Sbjct 857 CCTCGTGCTTCTTGCTGACCATGAAGGACGACAGCATCGAAGGGATCTACGACACCTTGA 916 Query 7769 GCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGC 7828 |||||| || ||| |||| ||| || || ||||| | | ||| | | | Sbjct 917 AGTCCTGCGCCTGCATCAGCAAGTACGCCGGGGGCATCGGTCTATCCATCCACGGCATTC 976 Query 7829 GCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGT 7888 || || | || ||| ||| | ||||||||| || ||| | |||||| Sbjct 977 GCTCCCAAGGCAGCTACATTCGGGGCACCAACGGTTCCAGCAACGGCATCATCCCCATGC 1036 Query 7889 TGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA---AAGCGCAAAGGCG 7945 ||||||| ||||| || | | || | || ||||| || ||| |||||||| ||| Sbjct 1037 TGCGCGTCTTCAACGACACCGCACGGTACGTCGACCAAGGCGGAGGCAAGCGCAAGGGCT 1096 Query 7946 CCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAA-ATCTGCGT 8004 | ||||| || | |||||||||||||||||| ||| | ||| || || || Sbjct 1097 CGTTCGCCATGTACCTTGAGCCGTGGCACGCGGACGTTTTTG-AGTTCTTGGATTTGAAG 1155 Query 8005 CGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCC 8064 ||| ||| ||| || | || ||||| || |||| || ||||| | || Sbjct 1156 AAAAACCACGGTGACGAGAACGCCCGCGCCCGCGACCTGTTCTACGCGATGTGGATCCCA 1215 Query 8065 GATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGT 8124 || || || |||| |||||| || | ||||| || ||| | | | || ||| | ||| Sbjct 1216 GACCTTTTCATGAAGCGCGTACAGTCCGACGGGCAGTGGACCTTGTTCTGTCCCAA-CGT 1274 Query 8125 TGCCCTTTATT---AAAAAACGTTTACGGTTCAA--AATTTGAACAATTGTACAAACAAT 8179 |||| | | | |||| | || | | | || ||| |||||| | | Sbjct 1275 GGCCCGTAACCTGCACGAAACCT----GGGGCGAGGAGTTCGAAACCTTGTACGCCAAGT 1330 Query 8180 ACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCGC----GACCTGCACCGCGCC 8235 |||| || ||| | | | |||| | ||||| || || | Sbjct 1331 ACGAGGCAGAGGGCA---AAGGGTT-CAAGACCATCCGCGCCCAGGAATTGTGGTTCAAA 1386 Query 8236 ATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAAC 8295 || | ||| ||||| |||||||| | ||||||||||| ||||| ||| |||||||| Sbjct 1387 ATCCTTGAAAGTCAAGTAGAAACCGGAACACCGTACATGCTCTACAAGGACTCTTGCAAC 1446 Query 8296 GCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATT 8355 ||||||||| || ||| |||| || ||| | || || ||||| | || || Sbjct 1447 CGCAAAAGCAACCAGCAAAACTTGGGAACTATTAAATCGAGTAACTTGTGCACGGAGATC 1506 Query 8356 GTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT---A 8412 | ||||||| || || ||||| | ||||||||||| | ||||| | || || | Sbjct 1507 ATCCAGTACACTGCCCCGGACGAGATTGCCGTTTGCAACTTGGCGTCCATCTGCTTGCCA 1566 Query 8413 AACGCGTTCGTTG-----ATCGACGCTCAAACACT-TACGACTTTGAACAATTGAAAAAC 8466 || |||||| | | || || | || | ||| || | | || | Sbjct 1567 AA---GTTCGTGGACACCAGCGGCGACAAGCCAGTGTACAACCACAAGGCACTGTTCGAT 1623 Query 8467 GCCGTGCAA---GTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCC 8523 | || || ||||| || ||| || | || |||| || ||||| | || || Sbjct 1624 GTTGTTAAAACCGTGACCGT---CAACTTGAACCGTGTCATCGACGTCAACTACTACCCA 1680 Query 8524 TTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGT 8583 |||| || || ||| || || ||||||||| | || |||| ||||||| ||||| Sbjct 1681 GTGGAGGAGGCTCGCTACTCCAATATGCGCCACCGCCCAATTGGGCTGGGCGTCCAAGGG 1740 Query 8584 CTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTC 8643 || ||||||||||| || ||||| | || | ||||||| |||| || || | Sbjct 1741 CTTGCCGACGCGTTCATTTTGATGCGCTTTCCATTCGAAAGCGAAGAGGCCCGACAATTG 1800 Query 8644 AACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCC 8703 |||| | ||| ||||| |||| | || ||| | || | || | | | | Sbjct 1801 AACAAGGAGATATTCGAAACCATGTACTTCGCCGCGAT-GACCGCGTCTTGCGAGGAGGC 1859 Query 8704 CGA--GAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGC 8761 ||| | | || ||| ||||| | ||| | ||| | || | | | || || || | Sbjct 1860 CGAACGCTTCGGACAC-TACGAGACCTACCCAGGCTGTCCAGTCTCCAAAGGCATCTTCC 1918 Query 8762 AATACGACATGTGGAATGTCACGCCCAC--CTCTTTGTGGAATTGGAGCGATTTGAAACG 8819 || ||||||||||| || || || || | || ||| | || | | || | Sbjct 1919 AACCGGACATGTGGAACGTTACCCCAACGGACCGATG-GGACTGGGCGGAACTTCGCGC- 1976 Query 8820 CAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCAC 8879 ||| | || | ||| | ||||| ||| || | || || ||||| || ||| | Sbjct 1977 CAATGTCGCCAAGCACGGCGTACGCAACTCGTTGCTCGTCGCGCCAATGCCGACGGCCTC 2036 Query 8880 GACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGT 8939 ||| | ||||| |||||||||||||||| ||| || || | ||| | |||| ||||| Sbjct 2037 GACCTCACAAATTATGGGAAACAACGAATGCTTCGAACCATACACGACCAACATGTACAA 2096 Query 8940 GAGACGAGTGTTGGCCGGCGATTTTTTAATGC-TGAATCGTCATTTGATGCGCGACTTGA 8998 ||||| ||| | || || || ||| ||| | || || ||| |||| ||||||| Sbjct 2097 CAGACGTGTGCTTGCAGGAGA-GTTTACGTGCGTCAACAAGCACTTGTTGCGTGACTTGA 2155 Query 8999 TCGAAGCGGGCGTTTACGACGACAA-AATGCGCGATGCCATCGTGGAAGCCAACGGCAG- 9056 ||| | | | | ||| ||| ||||| | ||| | ||| | || | Sbjct 2156 TCGCGTTGAACATCT-GGACCCCAAGCGTGCGCAACCAGATCAT---TGCCGATGGAGGA 2211 Query 9057 --CGTTCAGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGG 9114 ||||| ||| || | | | || | || ||||| ||||| || ||||| ||| Sbjct 2212 TCTGTTCAAAACGTTAAGGGCCTTCCCAAGCAGTACAAAGATCTGTACAAGACCGTCTGG 2271 Query 9115 GAAATGAAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAG 9174 ||||| | |||| || | | |||||| || || | || || || || || || Sbjct 2272 GAAATCAGCCAAAAGACTATCCTTACCATGGCCGCAGACCGTGGTGCATTCATCGACCAA 2331 Query 9175 AGTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCAT 9234 |||||| ||| |||||| | | ||||| || | || | || || || || Sbjct 2332 AGTCAAAGTTTGAACGTGCACATCGCCGCCCCCTCCACCGGAAAGTTGACCTCAATGCAC 2391 Query 9235 TATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCAC 9284 | || | ||||| | |||| | ||||| || |||||||| |||||||| Sbjct 2392 TTTTACGCCTGGAAGAAGGGTCTTAAAACCGGTATGTACTACTTGCGCAC 2441 >seq6558 Length=25225 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || |||| ||||| ||||||||||||||| Sbjct 2753 CCCCCCCGGAGGCGAAGGACGAGGTGGAGGGTGGCCTCCTTCTGAATGTTGTAGTCGGAG 2694 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | |||||| || ||||||||||| || || || ||||| || Sbjct 2693 AGCGTTCGGCCGTCCTCCAACTGTTTCCCCGCAAAAATCAACCGTTGTTGGTCGGGGGGG 2634 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| ||||| ||||| || | ||||| || | || ||| Sbjct 2633 ATCCCTTCCTTGTCCTGAATCTTTTGCTTGACGTTCTCAATGGTGTCCGAGGGCTCGACG 2574 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| || || || || || ||||| || || || ||||| Sbjct 2573 TCCAAGGTAATCGTCTTCCCCGTCAACGTTTTCACAAATATCTGCAT 2527 >seq1992 Length=1353 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 |||| || | || || | ||| | ||| | ||||| || || || || ||||| || | Sbjct 853 TTCCCCCGCGAAGGCGAAGCACCAAGTGCAACGTGGCCTCTTTCTGTATATTGTAATCCG 912 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || | ||| || | |||||| || ||||||||||| ||||| |||||||| Sbjct 913 ACAGCG-TGCGGCCGTCTTCCAACTGTTTCCCCGCAAAAATCAACCGCTGTTGATCGGGA 971 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || |||||||| ||||| || || || | ||||| || | || Sbjct 972 GGGATGCCTTCCTTGTCTTGAATCTTTTGCTTCACATTCTCAATCGTGTCCGAGGGCTCG 1031 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || ||||| || ||||| | || || |||||||||||||| Sbjct 1032 ACATCCAAGGTTATGGTCTTCCCGGTAAGGGTCTTGACGAAAATTTGCAT 1081 >seq229 Length=1895 Score = 104 bits (114), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || ||||||| ||| || |||| ||||||||||| | | | | ||| || ||| Sbjct 887 AGATGCAGCGTGGCTTCTTTCTGAACGTTGTAGTCGCTCAGGTTTCGCCCGTCTTCCAGC 828 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || |||| ||||| | ||| | | | |||||||| || ||||| Sbjct 827 TGCTTACCGGCGAAGATCAGCCGCTGTTTGTCGTGTTGGGTACCTTCTTTGTCCTGAATC 768 Query 134628 TTTTGTTTGACCGCGTCCA--AT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||| | ||||| || || || |||||| || |||||||| | |||||| || ||| Sbjct 767 TTTCGCTTGAC---GTTCACGATCGTGTCGCTCGGCTCCACGTCCAAAGTAATCGTCTTA 711 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || ||||||||||| || Sbjct 710 CCGGTCAGGGTCTTTACGAAAATTTGTAT 682 >seq4042 Length=4160 Score = 100 bits (110), Expect = 3e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | |||||| | || || | | ||||| || || || ||||||||||||| Sbjct 2625 TTCCACCACGGAGTCGAAGGACAAGATTCAACGTGGCCTCTTTCTGGATGTTGTAGTCGC 2566 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | ||| || ||| || ||||| || || ||||| || | |||||| ||||| || | Sbjct 2565 CCAAGGTTCGACCGTCTTCCAGCTGCTTCCCGGCAAAGATAAGACGCTGTTGATCCGGGG 2506 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || || || |||| || || || | |||||| || ||| | Sbjct 2505 GAATGCCTTCCTTGTCCTGGATCATTTGCTTCACGTTCTCGATCGTGTCGCTCGGTTCGA 2446 Query 134665 CGTCGAGAGTAAT 134677 |||| || ||||| Sbjct 2445 CGTCAAGGGTAAT 2433 >seq1888 Length=501 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639 || || | |||||| ||||| || || || ||||| || || || || ||||| ||||| Sbjct 2 AAGATAAGACGCTGTTGATCAGGGGGGATACCTTCCTTGTCCTGGATCTTTTGCTTGACG 61 Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 || | || || | ||||| ||||| || ||||||||||| || || ||||| Sbjct 62 TTCTCGATGGTATCACTTGGCTCCACATCGAGCGTGATGGTTTTACCCGTCAACGTTTTT 121 Query 134700 ACGAAAATTTGCATTTTGTTT 134720 |||||||||||||| ||| || Sbjct 122 ACGAAAATTTGCATATTGATT 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505353621701760